UFO02342.5prime Sequence
1124 bp (1021 high quality bases) assembled on 2008-12-21
> UFO02342.5prime
CAGTCGACATGCAGGACCCAAACGAAGATACCGAGTGGAATGATGTGCTC
CGAGCCAAGGGAATAATTGGGCCCAAGGCGAAGGAGGCGGAGATCACAGA
GGATCAGATCCAGAAGCTGATGGACGATGCCATCCAGCGGCGCACAGATC
TGCCACTGAATGAAGGCCAGCGCGACAAGAAGATCGACGACATGTCGCTG
GACGAACTCGACGAACTGGAGGATTCCGAGGACGAGGCTGTTCTAGAGCA
GTATCGCCAGCGACGCATCGCCGAGATGAGGGCCACCGCTGAAAAGGCGC
GATTTGGATCAGTGCGCGAGATCTCAGGACAGGATTATGTCAACGAGGTA
ACCAAGGCCGGCGAGGGCATCTGGGTGGTACTCCACCTGTATGCCAACGG
CGTACCGCTGTGCGCACTGATCCACCATCACATGCAGCAGCTGGCCGTCC
GCTTTCCACAGACCAAGTTCGTGCGCTCCGTTGCCACCACCTGCATACCA
AACTTCCCCGAGAAGAACCTGCCCACCATCTTTATCTACCACGAGGGTGC
GCTGCGCAAGCAGTACATAGGCCCACTGGAGCTGCGCGGCGACAAGTTGA
CCGCTGAGGAGCTGGAGTTTATGCTGGGTCAGGCGGGAGCAGTGCCCACC
GAGATCACGGAGGATCCACGGCCGCAGATCAGGGACAAGATGCTTGCCGA
TCTCGAAGACAAAAGCTCGGACTTCTACGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
CTCATTAAGCATCTGCCGACATGCAGCCATCCCAACGCATGATGAACCTG
AATCGCAGCGGAATCAGACTTTGTCGCCTTGCGTATATATTGCCCATGTG
AAACGGGGCGAAGATGTGCCAATT
UFO02342.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| viaf-RA | 1158 | CG18593-RA | 134..855 | 7..728 | 3610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11992156..11992871 | 728..13 | 3580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:41 has no hits.
UFO02342.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:17 Download gff for
UFO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| viaf-RA | 128..855 | 1..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:31 Download gff for
UFO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| viaf-RA | 128..855 | 1..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:05 Download gff for
UFO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| viaf-RA | 128..855 | 1..728 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:05 Download gff for
UFO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11992156..11992877 | 3..728 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:31 Download gff for
UFO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11985256..11985977 | 3..728 | 99 | | Minus |
