UFO02351.5prime Sequence
1136 bp (1043 high quality bases) assembled on 2008-12-21
> UFO02351.5prime
CAGTCGACATGTTGTTCCGTTCGCAAAGTGTGTACATGATGGTGGCGATG
CTCGTGGTCGCCTTGAGTGGCTACCAGGTGCAGTCCTATAGCGCCAAGGA
TATTCTTGCCGATGTCTTGATGACGGATCTGCTGAATCGCATGGACAAAG
ACATGCAGGTGGGCTATTACGACGTGGGCAACGAGGCAGCCGCTGGCTCC
AAGGACAACGTGGACCTGGTCTCCCGGTCGGAGTACGCGAGGCTGTGTGA
CGGCGGAAGCGACTGCATCCTGCAATCGGGCTCGGCATCGGGAGCTGCCT
CCCATCCTTCGCTGCGGGATGACGAGTTTCTGCAGCACAGTTCGCTGTGG
GGTCACCAGTTCATCTCCGGCGGAATGGGAGAGGGTCCCAACAGGTATCC
CACTATAGTGAAGAACGACGCCGGCCTGCCTGCCTACTGCAACCCTCCTA
ATCCCTGCCCTGAGGGCTACGACATGGAGACGCAAGGCGGCAGCTGCATT
GTCGACTTCGAAAACACGGCCATCTTCAGCCGGGAGTTCCAGGCCGCTCA
GGACTGTACCTGCGACAACGAGCATATGTTCGACTGCTCGGAACAGGATA
GTGCTGATGTGGGCGGCGACAAGGGTGACCTGAACTCCGCCGTGGAGCAG
TACATCATGCAGATGGGCCAGGAGAACAGCCTGAACAACGTTAACAGCCT
GGCTAAGAAGGCCGGATATCCTGTGATGCCCGATCCTCGGCTGGACGACG
CGGTCATAAACCCGTTCCTCCAGGGCGACCGCTTGCCCATAGCCGCCAAG
AAGGGCAACCTTTTATTCCACGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGCACGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGTCATTACTGATTTTATCACAGGAGTCAGCGAGCTCGAATATCAAATTA
CGCCGCCTGCCACTCAATCGCAGTAACTGTGTAATTCATTAGCATTCGCC
GACTGAGCCACTCCACGCATGAGTACTGATCGCACG
UFO02351.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RA | 1133 | CG1168-RA | 153..965 | 9..821 | 4065 | 100 | Plus |
| 7B2-RB | 1148 | CG1168-RB | 187..980 | 28..821 | 3970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5377014..5377807 | 28..821 | 3970 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:37:13 has no hits.
UFO02351.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:08 Download gff for
UFO02351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 173..1001 | 1..832 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:01 Download gff for
UFO02351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 173..1001 | 1..832 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:40 Download gff for
UFO02351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 147..975 | 1..832 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:40 Download gff for
UFO02351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5377014..5377817 | 28..832 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:01 Download gff for
UFO02351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1202736..1203539 | 28..832 | 99 | == | Plus |
