UFO02355.5prime Sequence
1106 bp (983 high quality bases) assembled on 2008-12-21
> UFO02355.5prime
CAGTCGACATGAATCGCCATCAGCTGGCACTTCTCCTGGTTGTCGCGGGT
CTGGCCATGATTGCGGCCAGGCCAGGTCCACAGAATCCGCTAGAGTCGCT
GGGCATGGGCGCCATGTCTCTGGCCGGAAATATAGCGGAGGCAGTTCAGA
GTGGCGCCGCCATCTCCCGCGACGTCGACATTGACAATCCCCTGATGTCC
GTGCACTCGAAAACGGCCGTTGGCTATGGAGATGCCATACGTCCCATTGC
CACCGATTCATCCGAGGAGGATCGTCGTCGGAAGCGAAGGCGGCGGAGCC
TGCATCGCCTCAAACGCGCTCCTTGCTTCTGGAAAATGAGCGCTGCCGCC
ACCACAGCGGCGTCCGCCGACGATGACGTGGAGGCCAGACGGAGACGAGC
TCAAAAGCGGGCCGCCAACAATGCCTCCCGATCCCGAGTGAGTCCCAAGA
CCACTGGCAAAAAGAACAAGAAGTTGGTGCGACGACGACGGCAGGAGGAG
AAGGGCATGGAAGTGACACAGAATATGGACGGAGCGGATCCCTTGGGCCT
GGGCACCAGAATCAAGGCCATGTGGCTTTCGTTTGTGAACAACGTAGCGG
ATGTGGTGCAGCAGGTGCGCCAGAAGATCACCGAAACGGCCAACTCCACG
GCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCGCCCTGC
ACTCATCGCAGTACTGTGTATTCATTAGCATTCTGCGACATGCAGCATCA
CAAACGGCATGATGACCTGATCGCAGCGCATCAGCACTGTCGCTGCGTAT
ATATTTGCCATGTGAACGGGGGCGGAGAGTTGTCGTATGCCGTAATCAAC
TGGTGACTACCAGGAATGCTGAACGAAACTATTCATACCTTACGGAGTTA
GCCAGG
UFO02355.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 744 | CG6290-RA | 15..659 | 9..653 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18437504..18438148 | 9..653 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:43 has no hits.
UFO02355.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:02 Download gff for
UFO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..645 | 9..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:11 Download gff for
UFO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..645 | 9..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:04 Download gff for
UFO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 15..659 | 9..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:04 Download gff for
UFO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18437504..18438148 | 9..653 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:11 Download gff for
UFO02355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18331537..18332181 | 9..653 | 100 | == | Plus |
