UFO02357.5prime Sequence
1124 bp (1008 high quality bases) assembled on 2008-12-21
> UFO02357.5prime
CAGTCGACATGATCCAGCTGCTCCAGTTGCTTCTATGTACTATTCCACTC
GTTGTGGGCGAGGTTCTGCCCCTGCAACTCGATTTGGACAACAGTCAAAT
TACCATACGGCGAAGTGCCAGTCGCGATGACAAATTGCAGGTATTCCACA
GCATCTGGGGCGCCATTCGCTCCGACTTCGCCACCGATACGGACAAGGTG
AAGGGCCTGTACAGTCAGCTGGGCGGATATATTCGCGACGATGTGCAGTG
CAGTAGCGGCTCCACGGGTCGATCTGCCTGCGAGCTGCAGCAGGAGGTGC
GACGCCACCTGCGGACCCTCATGGCCCAGCGGCTGGCCAATCTGTTGAAC
GCCGAGGAGAGCATTCAGACATACGGTATGTACATAGCGGCCAGTGTGGA
GCCCGCCCTGGTCAGGGACATTCTGGTGCACGCCATCGAGGACGTGTACT
TCCATCGACCGCTGGAGAAGCTGGTGCAGCAGCTGGAGCAACTGTACGCG
GATCGCGACGAGGTCAGCTTTCGCACGATGATCGAGGCGCAATTGGCGCT
CTTCTGGCGCTATCAGGCCATGCAGGACAGCAGCGAGGCGTACCTGTTCA
ACGTCGCGCACATGGTCAGCAAGATCCGGAGCCATCACATGTACGCCAGC
GTCGATGCGGATCTCCAGAAGCGAGTGGAGGCATTGAGCCAACGTCTGCC
GCCCGTTCTAGACTTGCTCTTCGATCCGCAGGGATTCTGCCTGCTGAGTC
GCTCCGATCGCGAGTACATCTACACGACCATAACGGACGAGTGGAACTAC
GGTCTGAATGGGCGGCAGATGTTCTCCTGGCGCGAGAAGAACTTCACCGA
TACCGCGGGCCTGACACGCGCCTTCGTCCAGGAGCAGCACTCCACGCCGC
TCTTCACGCTGCGTAGCGAGCTCTTCAGTGTACTACTTCGTCGATCCCAG
CAAGGGCAATCGCTTGACCGCCCTGCGCTCCGCAGTCCCAGCTCTCGACA
GCACTGGACCATCGCCCTACGCGGGCGACGCACTCATCTCGCAGCGCGAC
TCACGCCTCTTGTGCTTGCGAAAGTTCGACGACGATCGTCGCTCTGGTGA
AAGTCGCCGGCTGAAGCACCCCGC
UFO02357.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42512-RA | 1782 | CG42512-RA | 496..1595 | 9..1101 | 5080 | 98.2 | Plus |
| CG32573-RC | 1332 | CG32573-RC | 46..1145 | 9..1101 | 5080 | 98.2 | Plus |
| CG32573-RA | 1782 | CG32573-RA | 496..1595 | 9..1101 | 5080 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16652079..16653024 | 99..1039 | 4345 | 98.7 | Plus |
| X | 23542271 | X | 16651927..16652016 | 9..98 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:12 has no hits.
UFO02357.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:59 Download gff for
UFO02357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1600 | 1..1107 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:13 Download gff for
UFO02357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1600 | 1..1107 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:01 Download gff for
UFO02357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1600 | 1..1107 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:01 Download gff for
UFO02357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16651920..16652016 | 1..98 | 96 | -> | Plus |
| X | 16652079..16653093 | 99..1107 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:13 Download gff for
UFO02357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16545953..16546049 | 1..98 | 96 | -> | Plus |
| arm_X | 16546112..16547126 | 99..1107 | 97 | | Plus |
