UFO02359.5prime Sequence
1076 bp (992 high quality bases) assembled on 2008-12-21
> UFO02359.5prime
CAGTCGACATGGCAAGTCACAGCTTTTTGTGTTTACAGGAGAACGAGTAC
TTCCAGGATCTATTGCACACCAACCAGCGGCGTCTGCTGAAAGTTTCCCG
GGATCGTACCTTCCTGCTGGACCGTCTGCTGGTGTACGAGAAGCCGGCCA
AGGACTCTAGCGACTCGGATGCCACCGACAGCTCCGATTCGGAGCCAGCT
TCTACGTCCGGCGTTGCCGGCGGATCGCAAACATCCAAGGACGCCATTCG
GCGCAAGCACAAAGACAAGGGGGCACCAGGAATTCCAGGTGTGCCTCCGC
ACATGCCCACAGTGGGCGCCCCACGAGGTCGAAGACGAAAAATCCTAACC
GGAATGTTGCCCGCGAACCATGGAATCCCAGCAATTGCTGCGAAAAAACA
ACTTACCGCCACGGTGTCACCTTCGCAGCAGCCACCGCAACTACAGACTG
CTCCGAAGGATGTGTCGCCCGGCCTCAGCCAAGCGGAGATTGCCCGCCAG
CTGCAGGAGCGACGACCGACGCCGTTGGAGCTATTGAGTCCGGAATGCAC
TTCGGCCACCGTGCCCACAACGATGCTCAGCGATGAAAGCCCCTCTAAGT
GGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAAATGGA
AGCCATCACAAACGGCATGATGAACCTGATCGCAGCGGCATCAGCACTTG
TGCTTGCGTTATAAAATTTGCCATGGTGAAAACGGGGCGAAGAGTGTCCA
TATTGGCCACGTTTATTCAACTGTGACTCACCCATGATTGCTGAAACGAA
ACATATTTCAATAGGTAAGCAATGGC
UFO02359.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-RA | 1044 | CG18004-RA | 317..879 | 39..601 | 2815 | 100 | Plus |
| CG18004-RB | 1168 | CG18004-RB | 441..1003 | 39..601 | 2815 | 100 | Plus |
| CG18004-RD | 1026 | CG18004-RD | 317..861 | 57..601 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10885560..10886153 | 9..602 | 2970 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:27 has no hits.
UFO02359.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:12 Download gff for
UFO02359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RC | 237..833 | 9..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:44 Download gff for
UFO02359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RB | 441..1003 | 39..601 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:36 Download gff for
UFO02359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RB | 441..1003 | 39..601 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:36 Download gff for
UFO02359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10885560..10886156 | 9..606 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:44 Download gff for
UFO02359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6773065..6773661 | 9..606 | 99 | == | Plus |
