UFO02363.5prime Sequence
1124 bp (1016 high quality bases) assembled on 2008-12-21
> UFO02363.5prime
CAGTCGACATGTTCAAGCATACTTTCACAGATTTGACCAAGTTGCCGAAA
CAACGGGTTCGCCAATGGCTATCCACATTCGAATCCGTGATCCTTGATGC
CGATGGAGTCCTTTGGCACTTCTCGAAGGCAATTGACGGAGCTGTGGATA
CTTTCAATTACATGAACACCACCGGCCGAAAGATTTTCATAATCTCTAAC
AATTCCGAGATTTCAAGGCAGGAGATGGCCGATAAGGCGAAAGGTTTTGG
CATAGAGATCAAGGAGGATAATGTACTGACTTCGTCCTTTTCGTGTGCCA
ATTTCCTGGCTGTCAAAAACTTTCAGAAGAAGGTTTTCGTCATGGGCGAG
AAAGGAGTTCATTTTGAGCTGGAAAAATTTGGCATCTGCTCCCTGAAAAT
GTCCGAAAAGCTGGAGAAGCCCATGCACGAGTTCGTCACTGAGTTGGAAC
TGGATCCCGATGTGGGAGCAGTAATTGTGGGCCGGGATGAGGGTTTCAAC
ATGGCCAAGCTGGTTCGAACCGGCAGCTATCTGCTGAATCCCGATGTCAT
TTTTCTCGGCACCTGTTTAGATGCCGCCTATCCCATCGGAAATAACCGGG
TGATGGTGGGCGCCGGTGCCACCTTGGCGGCCATGAAAGCCTATACCGGA
AGGTCGCCGCTGGTGCTGGGAAAACCCAATCCCTGGATGGCGTCTACACT
CATGCAGTCCGGGGCCATAAAGCCGGAAACCACACTAATGGTGGGCGATA
CACTGCAGACGGATATGCACTTCGCTTCCAACTGTGGTTCCAATCCCTGA
TGTCGGCAGTGGTGTGAACACCCCGAAGGAAGTGCAGCAGATCATCGAGG
AGGGTGACCCCAAGAAGAAGATCCTGGTGCCAGATACCTATCTTCCCAGC
CTCGGCCACATGCTGGAGTTCCTTCTGCGCAAGCTTTCTAGACCATTCGT
TTGCGCGCGGGCCCAGGTTAGTGGTCATAATCATAATCATAATCATAATC
ATATCCACCTAGCCTAGAGATCTTGGTCATGACTAGTGCCTTGGATTCTC
ACCAATAAAAACGCTGGCGCACGAGCGTCTGAACAATTCAGAGTGAGATC
TGAAGTCATTACTGTAATCTAATC
UFO02363.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32488-RB | 1245 | CG32488-RB | 22..938 | 9..923 | 4520 | 99.7 | Plus |
| CG32488-RA | 1040 | CG32488-RA | 22..938 | 9..923 | 4520 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3015306..3016048 | 751..9 | 3715 | 100 | Minus |
| 3L | 28110227 | 3L | 3015068..3015241 | 923..752 | 755 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:40:02 has no hits.
UFO02363.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:54 Download gff for
UFO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32488-RA | 18..942 | 2..928 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:48 Download gff for
UFO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32488-RA | 18..942 | 2..928 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:54 Download gff for
UFO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32488-RA | 18..942 | 2..928 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:54 Download gff for
UFO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3015068..3015241 | 752..923 | 98 | <- | Minus |
| 3L | 3015306..3016052 | 2..751 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:48 Download gff for
UFO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3015068..3015241 | 752..923 | 98 | <- | Minus |
| arm_3L | 3015306..3016052 | 2..751 | 99 | | Minus |
