UFO02366.5prime Sequence
1114 bp (1001 high quality bases) assembled on 2008-12-21
> UFO02366.5prime
CAGTCGACATGTCCGTAAACTTGGACGGTTCTGAAGAAAAGATGGAGCTG
AAAAAGCATGTGCCGTACATCCTGAACGGGGAACTGTATCGCATCGAGAA
GCAGGTGGGCGACAATGTTACGGTCAAGTGCTGCTACTGTCCGCCGGATC
GGATTTATCGCGGCAGTGTCCGCTCCACCGGGAACTTTCACATGCACATC
AAGAGACGTCATAGTTCCTTGTTGGGCAAACTCCATGAAATGAAGGTGGC
TGCACTGGAAGAACGCCGTGATCGGATCATGAAAAACCGACGCTTTGCCA
AGTCGCGCAAGAAGGCACCAGTTGCGGTTGCAGCCACAAGTACAGCTGCG
CAGAGCGATTCCGGGGTGTTCGTGGACATGCAAGCTGCTGTTCCGTCTGG
AAACGAAAGCCACGAGCTGAAAATCAAAACGGTTTTTCAGCGCCACAAGC
AAGAGCAGGAGGGAGCTACCCGCAAGCTCGAAGATTCCACTTCAGATAAA
GCTAATCTACCAAATATCCCTAAGAACTTGGGAATTGTCGTTCAGAACGT
CTCAAACATCTCGGTGGAAACACTGCCCGGCGGTTCGACTCCTGCCAGTG
TCTCCTTTCTGGGTCGTCCTGTCAAGCCTGAGCAGGGTAGTGGTCCGTCA
TTCCTGGCTGATCAGCCGGCTGCCATAGATTTGAGCCAGGTTCCACCAGT
GCAGGGCGAGAGTAAATCCAGTGGATCGCTGGCTTCATCGATGGAGGACG
TCTCCATGGAGTACTCACGCTCCCAGGCCCTCTCACAATCGCTATCCATG
GCCCACTTCTTGGAGCATCCTCAGCGAGATGTGCTGCAGCGCCTGTAGCG
CTCGATGGCCCAAATAAGTCAAGAGTTGCACTGCCGCACCGCATCGAGCC
ACACCGCATGTGTGAGCAGCCAAGTTCAGTTTCTAAATCCGATTTCAGTT
TGAGCCGATCTGGCAGCTTTCTAGACCATCGTTTGGCCCGCGGGCCCAGG
TAGTGTCATATCTATCATATCATATCATAATCACACTAGCCTAGAGATCT
GTCATGACTAGTGCTGGGATTCTCCCATAAAACGCCCGCGCACCCGAAGC
TTCGACATCCAATG
UFO02366.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| stil-RA | 1171 | CG8592-RA | 83..1040 | 9..958 | 4535 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12571335..12571752 | 549..958 | 1710 | 96.2 | Plus |
| 2R | 25286936 | 2R | 12570718..12570992 | 202..476 | 1375 | 100 | Plus |
| 2R | 25286936 | 2R | 12570449..12570643 | 9..203 | 975 | 100 | Plus |
| 2R | 25286936 | 2R | 12571143..12571218 | 475..550 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:31:05 has no hits.
UFO02366.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:51 Download gff for
UFO02366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stil-RA | 94..1060 | 9..966 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:48 Download gff for
UFO02366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stil-RA | 83..1049 | 9..966 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:38 Download gff for
UFO02366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stil-RA | 83..1049 | 9..966 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:38 Download gff for
UFO02366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12570449..12570643 | 9..203 | 100 | -> | Plus |
| 2R | 12570720..12570992 | 204..476 | 100 | -> | Plus |
| 2R | 12571145..12571216 | 477..548 | 100 | -> | Plus |
| 2R | 12571335..12571752 | 549..958 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:48 Download gff for
UFO02366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8457954..8458148 | 9..203 | 100 | -> | Plus |
| arm_2R | 8458225..8458497 | 204..476 | 100 | -> | Plus |
| arm_2R | 8458650..8458721 | 477..548 | 100 | -> | Plus |
| arm_2R | 8458840..8459257 | 549..958 | 97 | == | Plus |
