UFO02367.5prime Sequence
1109 bp (1018 high quality bases) assembled on 2008-12-21
> UFO02367.5prime
CAGTCGACATGACCAACAACGATGCGGCCGTGGAGGCAGCCGGCTCCAGT
CGGGCCAGCAGCAGCAAACAGCAGCTGAAGCTGGAAATCACCGAGAAGGT
GCGAGTCCTGTGCCTGCACGGTTACCGCCAGAATGGAGAAGCCTTCAAAA
ACAAGCTGGGCTCCTTCCGCAAGTTCGCCAACAAGTACGCAGAGTTCGTG
TTCATCACGGCGCCGCACGTGGCCAAGGCACTGGAGTCGGCGGCGGAGCC
TGTGCCGGAGCAGAGGAGTTGGTGGGCCAACAAGGACGATGGCTCCTTCA
AGGGAACAAACAAAGGTGGTCCCGCCTTCGGCTTTCAGGAGAGCCTGCGC
TGCGTTGAGGAGGCGTGGCGGACGCAGGGCCCTTTCCAGGGACTGCTAGG
CTTCTCACAGGGCGCCTGTTTCGTGGGTCTTATATGCGGCCTGGCCAAAA
AGAAGTTGACCTCCATCCGTCCGGAGTTTGCTGTGCTAGCCTCGGGCTTC
TTGTCTGGCAGTCTGGTGCACATGAGCGCCTACGAAGAGGCCATCAGCAT
ACCCACGTTGCACATCTACGGACAGACGGATGAGATCATTCCCAAGGAGA
TGAGCGAGTCCCTGGCTGCGCGCTTCAAGAACGCCGAGGTGCTGGAGCAC
AGCGGCGGACACTACTTCCCGGCCACGGCGCAGCAGAAGCAGACATTCAT
CAACTTCTTCCAGGATCGGCTGCAGGAGTACCTGGAGCACGAGGAGTTGC
AGCAGAGCGGCAATGCCTCATTCGTGGATAGCGGAGCGGAGGACGACAAC
GATGCCGAGGTGGCGGCCATGACGGCCGAGCTGGACGAGAGTGATGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGTCATAATCA
TAATCATAATCATATCATAATCACACTAGCCTAGAGATCCTGTCATGACT
AGTGCTTGATTCTCACATAAAAACGCCCGCGCACGACGTTCTGAACAATC
CAGAATGGAGTTCTGAGTCATACTGATCTATCACAGGAGTTCAGCCAGCT
CGAATTCATACGGCCGGCCCTGCCACTCATCGATACTGGTTATCATAAGC
ATTTGCGCC
UFO02367.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5412-RA | 1020 | CG5412-RA | 87..923 | 9..845 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20577139..20577586 | 9..456 | 2240 | 100 | Plus |
| 3R | 32079331 | 3R | 20577646..20578034 | 457..845 | 1945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:05 has no hits.
UFO02367.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:50 Download gff for
UFO02367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5412-RA | 132..972 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:09 Download gff for
UFO02367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5412-RA | 87..927 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:58 Download gff for
UFO02367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5412-RA | 87..927 | 9..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:58 Download gff for
UFO02367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20577139..20577586 | 9..456 | 100 | -> | Plus |
| 3R | 20577646..20578038 | 457..851 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:09 Download gff for
UFO02367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16402861..16403308 | 9..456 | 100 | -> | Plus |
| arm_3R | 16403368..16403760 | 457..851 | 99 | | Plus |
