UFO02368.5prime Sequence
1142 bp (1027 high quality bases) assembled on 2008-12-21
> UFO02368.5prime
CAGTCGACATGCAGTCACATCTCATCGCCATCCTGCTGGCCACCGTGGCC
ATTGGCTCCTGCATCGCGAATCCCAACCTCATCTCTGGTCCTTCGCGAAT
TCTTGAGATAATGAGCGCCACCAGTGATATCCAGCGTAATAATCCACAAC
TGACCGTAGAATGTTTTGACTACTATAATGACGTATTCAAAACCGAGTAT
GCGGAGTATGTGGATGAGTACAATCTGTGCGTCGATAAGTATGATGGCGG
TTATGAACAGGTTCTGGAACAGTACAATTCCGTTGTCTGGGACCTCAGCA
ATTCCACCTTCGAATCCTGCATGTTCCTGCTGGACTGCGATAAACAGAAT
AACAGCGAAAATGCTCTATCCTGCTACTCCACTGAGGGTCCGACATATTC
CAAGCAGTTGTCGAATGTGGCAGCCAATGCTTCGGTCTCGGTCAGTTCAC
TGCGTCAGCAGGTCGAAACACTGGTGTTCACCCGTGACCAATGCTGTTCT
GCAACGTCCAGGAACTATGAGATCCGCTCCGGCGAGTCCTACGAAGATCT
TCAGAAGTGCCTGAGCGGTGAGAATCCTGTGCCGGAAAGAAGCACCACCA
CTACCAGTTCCAGCTCCAGCTCCAGCACCAGCACCACCGCCGCCAACCCC
ACTACTACCACCACGACCCCATCTCCTTCAACCACCACCTCATCGTCTTC
CACCTCCTCAACAACGAGATCTCCATCGACAGTTGCGCATTTTAGTTCCG
TTGAAAACAGCAGTGGCAACAGCCAGCACCGATTTCAAGAAGACTGGACA
ATATTTTCAAACATATTCTTGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAACGCCCGGCGGCAACGAGCGTTCTGAACAATCAGATGGAGTCTGAG
GTCATACTGGATCTATCACAGGAGTCAAGCGGAGCTCGATATCAATACGC
CCCGCTGCCCTCATCGCAATACTGTTTAATCATAAGCATTCTCGGCGAAA
TGGGAGCATCAAACGGCATGAGAAACCTGAATTCGCACGCAT
UFO02368.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10912-RA | 910 | CG10912-RA | 35..849 | 7..820 | 4050 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18056125..18056561 | 820..385 | 2135 | 99.8 | Minus |
| 2R | 25286936 | 2R | 18056651..18057031 | 387..7 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:21 has no hits.
UFO02368.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:48 Download gff for
UFO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 23..851 | 1..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:24 Download gff for
UFO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 29..857 | 1..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:55 Download gff for
UFO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 29..857 | 1..829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:55 Download gff for
UFO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18056117..18056559 | 387..829 | 98 | <- | Minus |
| 2R | 18056652..18057035 | 1..386 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:24 Download gff for
UFO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13943622..13944064 | 387..829 | 98 | <- | Minus |
| arm_2R | 13944157..13944540 | 1..386 | 99 | | Minus |
