UFO02370.5prime Sequence
1113 bp (1017 high quality bases) assembled on 2008-12-21
> UFO02370.5prime
CAGTCGACATGCATTGGTATGCAATCCTCCAAGGATTCCTCCTGGGAATA
TCATCGATAATCATTTTATGGGTACAAGGAGTCGTTGGCTTGCCATTGGC
TACAACCGATCTGGAGTCACTTCCAATCGTCTTGGCAGAGGATGTTCCGG
TGGAGAGAGCTCCAAGGCAAGTAAAACCAGATCCGTCGACGTTCGATATT
TTCAAGGTGGATCAAAGCTCCAATAACCAAATGCAGCAGAAATCCGACGG
CTTCAGAGTGTTCGCAAAGAAACTACAGGATGATTATCACCGTAGAGCTG
GCTACAATGAAACTAATCCGCCACCAATTACTGTGACCCGAGGAAGCACT
ACTGCTCCTAAGAAAATCCATAAAAGTGGCATTCGACTATTTGCTTCTCC
ACAAGATCCACCTCCGCCTGAAGCTGCGGCGCCAGCTGATGGAGCTCCAG
CGGCGGCAGGAGCGGCTGAAGGAGGTGCCGCCGGAGGAAAAGGAACTGAA
CCACCCAAAGAGCTGACCGTCAGTATTCAACAATTCGTTACAAACCAATA
TGGGGAGAAGGAATACAATGCTTGGGGCGTCACTTTTGGTAGACATTTCT
TCGACACCCGTTTCGCCGTAGCTAGGCATGAAATACCTCGAATAACTGTG
GATCCGAAACCGGTCCGTAATTACTATCCAAAAATGGACAATCTGACCAC
CGTCTGCTTGAACAGATCGACCATCTACAATGAGATTAAAGTCGAAAAGT
GGCTGATGCGCCACGTCTACAGCATAAAGAAGAAAGTGCGCCCCTTCTTT
TTCTCCCTTCGCCAGCAGCTCTACGAGAAAGGGGATTCGGAGCAGTGCCA
CATGAGTCCTACACTGACTGGTTGGAGTACCAGGAGTGCGCCATTAGACG
CACCAGCGCATGAGTACTTTATCCCAGTATCCGCTACACAACTTGGCATT
AACGCAAGCTTTCTAGACATTCGTTTGGGGGCGCGGGCCAGGTAGTTGTC
ATAATCATAATCATAATCATAATCTAATTCACACCTAGGCTAGGGAGATC
CTGGTCATGGACTATGCTTGATCTCACAATAAAAACGCCGGGGCGCACGG
AGCGTTTGACAAT
UFO02370.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11018-RA | 1250 | CG11018-RA | 108..1058 | 9..953 | 4600 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19662650..19663546 | 63..953 | 4205 | 99.2 | Plus |
| 2R | 25286936 | 2R | 19662543..19662596 | 9..62 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:16:51 has no hits.
UFO02370.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:58 Download gff for
UFO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 108..1063 | 9..958 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:30 Download gff for
UFO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 108..1063 | 9..958 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:40 Download gff for
UFO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 108..1063 | 9..958 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:40 Download gff for
UFO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19662543..19662596 | 9..62 | 100 | -> | Plus |
| 2R | 19662650..19663551 | 63..958 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:30 Download gff for
UFO02370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15550048..15550101 | 9..62 | 100 | -> | Plus |
| arm_2R | 15550155..15551056 | 63..958 | 99 | | Plus |
