UFO02375.5prime Sequence
912 bp (878 high quality bases) assembled on 2008-12-21
> UFO02375.5prime
CAGTCGACATGTGCTTCTATCGGATTGTGGTCATCTGTCTTCTAGGCTCC
CTAGTGCCCTCCATAGCGGCATCCAAAGTCTGCGGACCGGAAAAGCATTG
CGTTCCCTACGAGCAGTGCAACGAGGGCTTAATGGTGGACGGAAAATTCT
ATCCGGATCGCAGCAGAACGACTTTGGATGAGAATTGTCACTATATGGAA
AAGTGCTGTAATATCCCCGATAAACTCCCGACTCCGAAAATTCCAGAGGA
GATGATGAGCTGCCCGTGTGGAGGACGCCATGATCTCTGGTACTACCTTC
GACCGCTGGGATATAAACAGCAAGAGGCCAAGTTCGGGGAGTTTCCCTGG
TTGGTGGCGGTCTACGGGTCGGATACTTATCTCTGCAGTGGAGCACTTAT
CACTCCGCTGGCGGTGATCACCACCGCGCACTGCGTTCAGAATTCGGAAA
TGGAGAAGGTTCGTCTGTTGGCCGGGGAATGGGATGCCGCCGTGGAGCTG
GAGCCCCAGCCGCACCAGCAAAGATCGGTTGTTGAGACATTAGTGCATCC
CAATTACACTCAAATGCCATTGGCCCACAAACATAGCGATACTTCTGGTG
GACAAGGAAAAAACCTTTCCAGCTGGCTCCTAATGTACAGCCCATTTGCT
TTGCCGCCTCCGCGAATAATGTACAACTACAGCCAGTGCTATGTGTCCGG
GTGGCAGAGGAGTGATTTTGGTAGAGCTGCAATCCTGCCCAAGCGTTGGA
CACTCTACGTCCTACCACCCCGATCAATGCAGGACCAAGTTGCGATTGTC
CCTCTTGGGGCGACCGCCACGCCCACAACGATAGCCTGCTGTGTGCGGGC
GGCGACAAGGTGACTTCCTCTGCGGGGAGTGGAAATGACCGCTGTGCCGC
TTAAGTGTTCTC
UFO02375.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9377-RA | 1191 | CG9377-RA | 83..983 | 9..912 | 4220 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13360109..13360793 | 912..225 | 2965 | 97.7 | Minus |
| 2L | 23513712 | 2L | 13361268..13361483 | 224..9 | 1080 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:16:47 has no hits.
UFO02375.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:41 Download gff for
UFO02375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9377-RA | 37..945 | 1..912 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:27 Download gff for
UFO02375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9377-RA | 75..983 | 1..912 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:39 Download gff for
UFO02375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9377-RA | 75..983 | 1..912 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:39 Download gff for
UFO02375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13360109..13360793 | 225..912 | 97 | <- | Minus |
| 2L | 13361268..13361488 | 1..224 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:27 Download gff for
UFO02375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13360109..13360793 | 225..912 | 97 | <- | Minus |
| arm_2L | 13361268..13361488 | 1..224 | 98 | | Minus |
