UFO02377.5prime Sequence
1131 bp (1014 high quality bases) assembled on 2008-12-21
> UFO02377.5prime
CAGTCGACATGGCTCTACGCGTCCAATTCGAGAACAACGACGACATCGGC
GTCTTCACTAAACTAACCAACACATACTGCCTGGTGGCCATCGGTGGATC
CGAGACCTTCTACAGCGCCTTCGAGGCGGAGCTGGGCGACACCATCCCGG
TGGTGCATGCGAATGTGGGCGGCTGCCGGATCATCGGCCGCCTCACCGTG
GGCAACCGCAACGGCCTGCTGGTGCCCAACTCCACCACCGACGAGGAGCT
GCAACACCTGCGTAACAGCCTGCCAGACGCCGTGAAGATTTATCGTGTGG
AGGAGCGCCTGTCCGCGCTGGGCAACGTTATCGCCTGCAATGATTATGTG
GCCCTGGTGCACCCGGATCTGGACAAGGAGACCGAGGAGATCATCGCGGA
CGTGCTCAAAGTAGAGGTCTTCCGCCAGACCATTGCCGACAACTCACTGG
TGGGCTCTTACGCCGTGCTGAGCAACCAGGGCGGCATGGTGCATCCCAAG
ACGAGCATTCAGGACCAGGACGAACTGTCGTCCCTGCTGCAGGTTCCCCT
CGTGGCCGGAACAGTGAACCGGGGCAGCGAAGTACTCGCCGCCGGCATGG
TCGTCAACGACTGGCTCTCCTTCGTGGGCATGAACACCACGGCCACAGAG
ATCTCCGTGATCGAGAGCGTCTTCAAGCTTAACCAGGCACAGCCCGCCAC
AGTGACGACCAAGCTGCGTGCGGCCCTCATCGAGGACATGTCCGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGGCAACCGAGC
GTTTCTGAACAATCCAGATGGAGTTCTTGAGGTCATTACTGGATTTTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTTTTTTATATTCATTAGGCATTCTGCGAAATTGCAGCAT
CACAAACGGCATGGATGAACTGATTCGCCAGCGGCATCAGCACTTGTCCG
CTTGGCGTATATATTTGCATGGGTAAACCGG
UFO02377.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF6-RA | 1056 | CG17611-RA | 230..964 | 9..743 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23849338..23850072 | 743..9 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:36:42 has no hits.
UFO02377.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:39 Download gff for
UFO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 220..967 | 1..749 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:41 Download gff for
UFO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 1..749 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:10 Download gff for
UFO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 1..749 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:10 Download gff for
UFO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23849333..23850080 | 1..749 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:41 Download gff for
UFO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19736856..19737603 | 1..749 | 99 | | Minus |
