UFO02379.5prime Sequence
1126 bp (1018 high quality bases) assembled on 2008-12-21
> UFO02379.5prime
CAGTCGACATGAGAGAAAAGTGGAAAGCTCTGTTGCTATTGCTTCAGCTG
CTTGCTCATTTGGAATCGGGTCAAGCTATTTGGTTTCCCTGGTACTTTCA
GCGCTACGGACTAGCCCCACATTCATCCCGCCATGGCGGAGGTCATAAGA
ACAACACAGACCCCGGGTCAACCTGCCCACCAGGCTACGAAATAAAGGCA
TCAGTGGCAGGATTGTCTGGCGGAACGGCCGGATGTGAACGCGTAGTTGG
ATCGAAAGCAGGACGCCTTTGCGACGATAATCCCGTGTTGATGCAACTGG
CGCGTCTCTATGTGGTGAGTCCTGAGAGGATTGTCCTGCTCCTGGCGCAG
CCATCACTAACCGAGTCCTGCGCCGAGATCACCGATGTGCTGGACAATAT
TCGGAACTCCATGCGCAATTGTGTCTTGGCACCGGATAACATATACGGAA
GACTAGCTGATGGACTGAGCTACTTCCAATCGGAGGTCTGCGTTGGTGGC
GATGGCAGCAACAGGAAGCGATGCACTGGACTCCAGGAGTCGCACAACTG
CCTCAAGGAACTCCGGACGGACATGATCGAGTGCGAGGCACCGGCTGATT
GGTACGAACGCAGGAATGCCAGCAAGGTGTGCCACATATTCAACGATGTT
CTCGACTGTTACTATACGAGGGCAGCCTTGTTGTGCGGACTTGAGGTTGC
CAGGCAACTAAGGTCCTTCGCAGGCGACAGCATGGGCAGAGCCATGATCC
ACAAGTGCGAGGTCAGCAAAAGGCTACCCCGGGTTGATAATGCCATGCCC
GTCAACGCAAGTAGTGGGGCTAGCTTAAGGTCATCATGGTTAGGTGCACT
TATTTCATGGATTTTCGTTATTTATTTTTCAGACATTAAATATATTTTTG
GATTATTGGTATATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATATCATATCATATCATATCATATTCACACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTGATCTCACCATAAAAACGCCCGGCG
CAACGACGTCTGAACAATCGATGGGATCTGAGTCATACTGACCATCAAGA
GTCCAAGCAAGCTGATTCATTACGCC
UFO02379.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4891-RA | 948 | CG4891-RA | 40..945 | 9..914 | 4530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16095036..16095941 | 9..914 | 4530 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:42:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1553..1591 | 23..63 | 119 | 80.5 | Plus |
UFO02379.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:38 Download gff for
UFO02379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4891-RA | 28..936 | 9..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:58 Download gff for
UFO02379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4891-RA | 40..948 | 9..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:28 Download gff for
UFO02379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4891-RA | 40..948 | 9..918 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:28 Download gff for
UFO02379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16095036..16095947 | 9..919 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:58 Download gff for
UFO02379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16095036..16095947 | 9..919 | 99 | <- | Plus |
