UFO02387.5prime Sequence
1106 bp (987 high quality bases) assembled on 2008-12-21
> UFO02387.5prime
CAGTCGACATGAGCAAGCCTTTGTCCTTCATCTCGATGGTGGCCGTGATT
TTGCTGGCCAGCTCCACAGTGAAGTTGGCCCAAGGAACGCTCTGCAGTGA
AAAGCTCAACGAGGTGCTGAGTATGGTGTGCGAGGAGTATAATCCCGTGA
TTCCACACAAGCGCGCCATGCCCGGTGCCGACAGCGATCTGGACGCCCTC
AATCCCCTGCAGTTTGTCCAGGAGTTCGAGGAGGAGGATAACTCGATATC
GGAACCGCTGCGAAGTGCCCTCTTTCCTGGGAGCTATCTTGGGGGTGTAC
TCAATTCCCTGGCTGAAGTCCGGAGGCGAACTCGCCAACGGCAAGGAATC
GTGGAGAGGTGCTGCAAAAAGTCCTGTGATATGAAGGCTCTGCGGGAGTA
CTGCTCCGTGGTCAGAAATGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACATATTCTCAATAA
ACCCTTTAGGAAATAGGCCAGGTTTCACCGTAACACGCACATCTTGCGAA
TATATGTGTAGAACTGCGAAATCGTCGTGTATTCACTCAGAGCGATGAAC
GTTCAGTTGCTCATGAAACGGGTAACAGGGTGAACACTAATCCCATATCA
CCAGGCTCACGTCTTTCATTGCCATACGAATCCGATGACATCATCAGCGG
CAAATT
UFO02387.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp2-RA | 670 | CG8167-RA | 66..477 | 8..419 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9800000..9800247 | 172..419 | 1240 | 100 | Plus |
| 3L | 28110227 | 3L | 9799763..9799926 | 8..171 | 820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:56:25 has no hits.
UFO02387.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:29 Download gff for
UFO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp2-RA | 60..482 | 1..425 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:10 Download gff for
UFO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp2-RA | 60..482 | 1..425 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:32 Download gff for
UFO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp2-RA | 60..482 | 1..425 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:32 Download gff for
UFO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9799757..9799926 | 1..171 | 97 | -> | Plus |
| 3L | 9800000..9800247 | 172..419 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:10 Download gff for
UFO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9792857..9793026 | 1..171 | 97 | -> | Plus |
| arm_3L | 9793100..9793347 | 172..419 | 100 | == | Plus |
