UFO02392.5prime Sequence
1109 bp (1012 high quality bases) assembled on 2008-12-21
> UFO02392.5prime
CAGTCGACATGAAACAATTCGCGGTTATATTCGCACTGGCTCTGGCTTCG
GTTTCGGCCATTTCTGTCCCTCAGCCGGGATTCCCCGAAGGTCGCATCAT
CAACGGCTATGAAGCGGCGAAGGGAGAGGCGCCCTATATTGTGTCCTTAC
AGACCACATCCAACTCGCACTTCTGTGCAGGAAGCTTGCTCGATGAGGTG
ACCATTGTGACCGCCGCACACTGCCTGACCTACAATCAGGGTCAGGCAGT
TGCCGGTGCACACAGCCGCACTGACCAGGAGAACGTTCAGATTAGGAAGT
TCACCAATGCCCAGTACGTGATCCACGAGAACTACGGTGGCGGTGTGGGA
CCCAACGACATCGGCCTAATTCTCCTCAAGGAAGAGGATGCCTTTGACCT
GAATGCCGTTGCCCGTGATGGCAGCAATCCGGTTTCCGCAGTAAGTCTTC
CTTCAAAGACATTCCAAGGCACTAGCGATGGATATCTGTACGGCTGGGGC
CGCGACAACTCAGGATTGCTGCCGCTGAACCTTCAGAAACTGGACGCTAT
CATTGTTGACTACAACGAATGCAAGGCGGCGTTGCCATCCAACAATTCGC
TGGCAGAAACCAATGTATGCACCCACACCCCCGGAAAAGCCGACGGATCC
TGCAACGGAGACAGTGGCGGCCCCCTGGTCTCGCAATCCAGCAGTCGAGG
AGCCGAGCTGATTGGCATCGTCTCCTGGGGATACACACCCTGTTTGTCCA
CAACCTATCCTTCCGTATACACATCAGTGTCTTCGTTTTTGCCTTGGATC
GATGAGAACCGTAAGGCGAAAGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGATTCTCCACAAT
AAAAAACGCCCGGCGCCACGAGCGTTCTGAACAATCAGATGGAGTTCTGA
GTCATTACTGGGATTCTATCAACAGAGTCAGCGACTCGAAATCAAATACG
CCCGGCCTGCATCATGCAGTATTGTTGTATATTCATAAGCATTCTGCGAC
TTGAAGCAT
UFO02392.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11912-RA | 898 | CG11912-RA | 27..839 | 9..821 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 318421..319233 | 821..9 | 4065 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:42:32 has no hits.
UFO02392.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:24 Download gff for
UFO02392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11912-RA | 14..834 | 1..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:57 Download gff for
UFO02392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11912-RA | 19..839 | 1..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:25 Download gff for
UFO02392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11912-RA | 19..839 | 1..821 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:25 Download gff for
UFO02392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 318421..319239 | 1..821 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:57 Download gff for
UFO02392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 318421..319239 | 1..821 | 99 | | Minus |
