UFO02394.5prime Sequence
1056 bp (878 high quality bases) assembled on 2008-12-21
> UFO02394.5prime
CAGTCGACATGTTTACAACGCTCCACAGCGAGGATACGGAATATTCGGCA
GATTCTGTGGAGTGGCTGACACACGATGATGCGGCAACGGGTTTCTTTGC
CTGCGGCACCTATCAGTTGGTCCAGGAGGAGGACGAGCCGGCGGCGGAGA
CTTCAGCCAAGCGTCCACGCAAGGGTCGCGTTTATTTATACCAGTTTGAA
GAGGAAAACTGCCGCCTGGAGCGGCTACAGTGCATCGAAACGTCTGCCAT
TCTCGACATGAAGTGGCTGCCGGCCTGGAGCAGTGAGTGTAATCCCCACC
TGGCCACGGTCAACTCTTTAGGCCAGATGGAATTGTACGAGTTTCTCCAG
GATGCGAAGCTACTGCAGAGGCGTACGTGTTTTAGCCTGGCGGAGCAGGA
TTCGTCGGAGGAAGCGCCATTGGCGCTGGCCCTAGACTGGCAACATGACG
GGCAGCACATCCGACTGGCCATCTCCGATTCCAAAGGCGGCCTAAATCTA
TTGAGCTACTCATCACAGGGTGAGATAATCCGCGAACGGTCGTGGTTGTC
CCATGGCTTTGAGGCTTGGACCTGTGCCTTTGATCGTTGGTCACCGCACA
TTCTGTACAGTGGTGGCGACGATATGCTGCTCATGGCCCACGATCTGCGC
ACCAAGCAGCGTGCGTGGACCAACCGGGCGCACATGGCTGGAGTCACCTG
TCTGCTAAGTCATCCGCGGCACGAAAACCATCTGCTCACGGGTAGCTATG
ATGAGCAGTTGCGTCTCTTCGACCCATATCGATGATGCGATCACTGGCGG
AACTGGACTTGAGCGGAGGCATCTGGAGGCTGAAGCCGCATCCTGCCCAG
CCCGATCTATCCTGGCCGCCTGCATGTACACACTTTAGCGTGTGCAGCTG
GATGTCCCGCACCTTGACCAGAGTTTACTGGCGCCTATAAGAGCATATAG
CATCTGCATCCGGGCTGATTGGCCACCCTGGAGAACCAGGGACGAATGCG
TCTCTGAACGATGGCACCATTGCTCCTTTTAAGAACACACATGGGTGTGT
ATCCTG
UFO02394.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3184-RA | 1179 | CG3184-RA | 33..1071 | 7..1040 | 4570 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6687746..6688742 | 995..7 | 4335 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:39:51 has no hits.
UFO02394.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:33 Download gff for
UFO02394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3184-RA | 24..933 | 1..906 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:55 Download gff for
UFO02394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3184-RA | 28..937 | 1..906 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:50 Download gff for
UFO02394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3184-RA | 28..937 | 1..906 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:50 Download gff for
UFO02394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6687838..6688747 | 1..906 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:55 Download gff for
UFO02394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6581871..6582780 | 1..906 | 98 | | Minus |
