UFO02416.5prime Sequence
958 bp (862 high quality bases) assembled on 2009-01-13
> UFO02416.5prime
CAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGGCCTTCGCG
GTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTGGATCCGTC
GCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTATCTGCCCC
AAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAAAGTGGCTG
CAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGATCTGTTAA
CGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGCATTCACCTCGCAG
AATGCCTCTCCGGATTGGCCAATATGACGGAGATCCAGGCGGAGATCGAG
GAGGCGAGTCCCAAGGGCGACCTGGACGTGGTCTTCGAGAAGTATTGCCT
CCGATTGCCGCAGGCCAAGACCTGTCTGAAGAACTTCAACGACGCGATCC
TGCCCTGCCTGACCACCGATGAGAAGACCCACAACGCGGTGCTGCAGAGG
ATTGCGGACAAGCTGCTGGAGTTCATATGCTACAAGAACGGAGACCAGAT
TGCGCTCTTTATCGCCGAAGAGGGCCCGGAGTGCCTGCAGCAGAGTCGCG
AAGGCATCGCCAATTGCCTGAACTCTTCCTTCGCCGGATATCTGCCCAAG
TCGATTAGCCCGGAGTGGGATCTGCCCCAGCTGGTCTTGGGTCCGAAGCA
GTGCGTCGACCTCTACGCATTCGAGACGTGCACCGTCAGTCTGCTGGAGA
AGTGCGATACGATCACTCCCAGCATATCGTGAGTCATGTTTCGATACGTG
AGGATGAGTCTCTGCCAGCCCACATCGACAGGTCAGCTGCAGCACGCAGA
GCCCTGCCCTGACAGTGATCCAGTCGCTCATCGTATCCCTTCATCTCCCT
GACTCTGCAGCTGCTATGTCACTTTCCTCGCCGGACTGCGAGCTTCCAAC
ATTCGTTG
UFO02416.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14629-RA | 1107 | CG14629-RA | 16..969 | 9..938 | 4135 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1051540..1052338 | 9..804 | 3845 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:48:27 has no hits.
UFO02416.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:10 Download gff for
UFO02416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14629-RA | 1..961 | 7..944 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:14:28 Download gff for
UFO02416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14629-RA | 6..973 | 1..944 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:32 Download gff for
UFO02416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14629-RA | 6..973 | 1..944 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:32 Download gff for
UFO02416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1051530..1052497 | 1..944 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:14:28 Download gff for
UFO02416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 945563..946530 | 1..944 | 96 | | Plus |
