UFO02421.5prime Sequence
1011 bp (864 high quality bases) assembled on 2009-01-13
> UFO02421.5prime
CAGTCGACATGGCGCTGATTCCGGCTGTTACCAGACTCACCTCCTCCGTA
ATTCGGATACTGGGTTGTAATCCCAGTGCCATGACGCTCCAGGGCACCAA
TACGTACCTCCTCGGCAGTGGCAGTAGGAGAATCTTGATCGACACTGGTG
ACGAAGACGTGCCGCAGTACATCGCTCACCTGGGAGATGTGCTACAGCAG
GAAAAGGCCTCCATCGACACCATCCTGCTGACCCACTGGCACCACGACCA
TGTCGGCGGTGTAAAGAGCATTGTGGGTACTAAATTGGCCGAAAAGGATT
GCCGCGTATTCAAGTTTGGGCGTACAGATGCTCCAGATGTGTGCCCCGAG
ATACCGACGGATATCAAACTCCATCCGCTAGCACACAACCAAGAGTTCAC
CACGGAGGGGGCGAATGTGCGGGTGGTTCACACACCCGGTCACACCACTG
ATCATGTGGTGCTGGCCATGAACGAGGGCACACTCTTCAGCGGCGATTGC
ATCCTTGGCGAGGGCACCGCCGTCTTCGAGGACCTATTTGAGTACATGAA
AAGCCTGGAGAAGATACTAGACATCAAGCCGCAGCGTATCTTTCCAGGCC
ATGGCAATGTCATTGAGGAACCAATTGGCAAGATTGAGTACTACATTAAC
CATCGCAACCAGCGAGAACAGCAAATCCTGCAGTTCTTCGTTCAGCGGCC
CAACGAAAACTTGCAGGCTATGGACGTCGTGAAGTGGTCTACAAGAGACA
CCAGAAACCTCTGGCCCGCCGCCGCCTATAACGTGAACCACCACCTAAGC
AAGCTGGAGAAGAGGAAAGCTGCGGGTCAGCAAGTCTGCGGATGAGAGTC
TTTGTGTACCAGCCACCAGTGCGCTCGCAAGCTTTCTAGACATCGTTTGG
CGCGCGGGCCCAGGTAGTGGTCATAATCATATCATATCATATCATAATCC
CAACTAGCCTAAGAAGATCTTGTCATGACTGTGCTGATTCTCCAACAATA
AAACGCCCGGC
UFO02421.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12375-RA | 1165 | CG12375-RA | 152..1027 | 9..876 | 4165 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8125806..8126681 | 876..9 | 3985 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:22:28 has no hits.
UFO02421.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:43 Download gff for
UFO02421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12375-RA | 114..1002 | 1..884 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:32 Download gff for
UFO02421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12375-RA | 145..1033 | 1..884 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:20 Download gff for
UFO02421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12375-RA | 145..1033 | 1..884 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:20 Download gff for
UFO02421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8125797..8126688 | 1..884 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:32 Download gff for
UFO02421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8125797..8126688 | 1..884 | 98 | | Minus |
