UFO02422.5prime Sequence
958 bp (841 high quality bases) assembled on 2009-01-13
> UFO02422.5prime
CAGTCGACATGGACGTACTACACGGACACGATCTGTACGATGAGCAGCTA
ATCGATCGAGTCGGCGACGCGGTGAATGAAGATGCTGGCGATGACTTGGA
CACATTGGAGGATGGACAGCAGCAGCAGCGCCTGGGAGTCAATCGTCAGA
TGGACATACTCCTGGACGCTCCTCAAGAGCCACCGTTGGGCGTTTTTCCG
GCGCAAGGAGGGCCAAATGGACCACCACGTCGGCGGAAGAAACGAAGTTT
CTACACTATGACCAAACCCACTCCGCCATGCCAAAGTCAGGAGCCGGAGA
TGTGCCTCCTAATGGCCAGTGTCACGAGGGCAATGCGTCACGTTCGCGAG
GATCAGCGAGGCGAGTACTTTGCAAATTACCTCGTCGAGAATATGACCAG
TCAGAACTACCCGAATGGTATGGGTCTGCCACAGCATTGGGGTCAGTTCG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGCAGC
CATCACAAACGGCATGATGAACCTGATCGCCAGCGCATCAGCACCTTGTC
GCCTTGCGTATATATTTGCCATGTGAAACGGGGCGAAGAAGTGTCATATG
CCACGTTTAAATCAACTGTGAAACTCACCAAGGATGCTGAAACGAAAAAA
CATATTTCCTCAATAACCTTAAGAATAGTCAGTTACCGTAAACACCGCTC
ACACTCTT
UFO02422.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| soti-RA | 1037 | CG8489-RA | 171..611 | 9..449 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14381089..14381529 | 449..9 | 2205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:15:15 has no hits.
UFO02422.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:13 Download gff for
UFO02422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8489-RA | 163..611 | 1..449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:01:07 Download gff for
UFO02422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| soti-RA | 163..611 | 1..449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:48 Download gff for
UFO02422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| soti-RA | 163..611 | 1..449 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:48 Download gff for
UFO02422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14381089..14381536 | 1..449 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:01:07 Download gff for
UFO02422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10206811..10207258 | 1..449 | 99 | | Minus |
