UFO02427.5prime Sequence
819 bp (693 high quality bases) assembled on 2009-01-13
> UFO02427.5prime
CAGTCGACATGATGTCCTTCAAGTCGTTCGTCCTGCTTAGCTTATCCCTC
GCTGCCATCAGTGCCTATGCCTACGCCCAGATCGCCCCTGGCTCCAACGC
GTACCTCCCGCCCACCAAGAATGGCTACGACTACTCGGAACCCAAGACCC
CATTCAAGCCCGGCCCACCTGGAAGACCAGCGGCACCTGGACCCCGGCCA
CCCGCACCTCCTGGCACTCCCCGCAACATACCTGGCCAGCCAGGCGATGA
CCATGTCCACGTGCCCGGCATGCCGTACGACTTCGAGTACGCCGTTCAGG
ATCCGGAGACCGCCAACGATTATGCGCACAAGGCGTCCAGTGATGGTGAC
GTGGTGACCGGCGAGTACCGCGTCCAGATGCCCGACGGAAGGACCCAGAT
CGTCCGCTACACCGCCGACTGGAAGACGGGCTACCACGCGGACGTGAGCT
ACGAGGGCGAGGCCACGTACCCGCAGGGACCACAGCCAGGAGCTCGTGGC
GGCGGCGGCGGTGGTGCTGGTGGTGCCGGCGGGTACAAGTACGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCCCACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCCCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAATCAGATGGAGTTCTGGGGTCATTACTGGATTTTTCAACAGGAG
TCCAGCGAGCTCGATATCAATACGCCGGCTGCACTCATCGGAGTACTGGT
GAATTCATTAAGCATTCTG
UFO02427.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr50Cb-RA | 867 | CG6305-RA | 234..767 | 9..542 | 2670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13804838..13805131 | 249..542 | 1470 | 100 | Plus |
| 2R | 25286936 | 2R | 13803625..13803741 | 39..155 | 585 | 100 | Plus |
| 2R | 25286936 | 2R | 13804363..13804456 | 156..249 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:22:20 has no hits.
UFO02427.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:38 Download gff for
UFO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr50Cb-RA | 208..746 | 9..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:28 Download gff for
UFO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr50Cb-RA | 234..772 | 9..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:16 Download gff for
UFO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr50Cb-RA | 234..772 | 9..548 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:16 Download gff for
UFO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13795176..13795205 | 9..38 | 100 | -> | Plus |
| 2R | 13803625..13803741 | 39..155 | 100 | -> | Plus |
| 2R | 13804363..13804455 | 156..248 | 100 | -> | Plus |
| 2R | 13804838..13805136 | 249..548 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:28 Download gff for
UFO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9691130..9691246 | 39..155 | 100 | -> | Plus |
| arm_2R | 9691868..9691960 | 156..248 | 100 | -> | Plus |
| arm_2R | 9682681..9682710 | 9..38 | 100 | -> | Plus |
| arm_2R | 9692343..9692641 | 249..548 | 99 | == | Plus |
