UFO02430.5prime Sequence
1072 bp (941 high quality bases) assembled on 2009-01-13
> UFO02430.5prime
CAGTCGACATGAGGATCCTACCAATTGTGATTCTGACCTTGATGACGGTC
CATTCCGGCTGCGGAAAGAAGCAGAGCAAGAAGGAAAAGGACAAGGGTCC
CTGTGGCAAACCGTATCTCAGGGAGCTAAACGGAAAGTGCTTCTATGTGG
GCATCAAAAAGATCAACTGGTTCGGGGCCCAGAACAACTGCCTGCGCAAG
GGCCTCAACCTGGCCGACGTGTCCACGATGGAGGACTTCAAGGCGGTGGT
ACACTACGTGACGTCACAGGTGGGCTTCGATGACTTCTGGTTCGGTGGCA
ACGATCTGCAGTCGGAGGGGCGCTTCAAGTACATCAGCAGCGGTAAACTG
GTGCGCTACATGGGCGACTCCAATATTGTGGAGCCGACTCAACGATCCAA
CCTGGACGACTGCCTGGAGATCAGGATCAGGCCCAATGTCACCGTCGTCC
TGGACGTGAACTGCCAGGAGAAGAAGTACTTCATCTGCGAACAGAACCAG
ATGAAGTGCGCCGTTCCCGCCGAGGACAGTGGGGATGGCCAGAAACACAG
CCACGAGCACTTGCATCACTTCCACCACGACGCGGGCCAGAAGGATAAGC
AAGAGACGGGGATCAAAGAGCAAAGTGTGGAGAGCGATTCACGGCCAGCT
GACAATTCGAATTCAACGGAAATCGGGGTCTCGAAAGAGAATGAAGCGGA
GGGCGCGCCGACTCCAGGTGATGGTGGTGGCACCACGGAGCCCGTGTTCG
AGAATGGCATGGAAAACGCCGCGGAACCCATTGCCGAGCAGGAGCAACGG
TGCCGCCAGGCGGCACGGGTCCACCCGCGGCGGCAGACGCAACTGGAGCA
GCCACGCCCGCACCGGATGCCGCGCAGCGGAAAGAGCACTCCGGCGGCAG
CTCCACAGCGGAGGAGCTCCAGCCGCCGAGCCGCCACTCCTGCACCAGCA
GCTCCGGAGGGCGAAGCAACCACAGCTCCGGCGGCGGAAGCTTCCAGACA
ATTCGTTGGCGCGCCGGGCCCAGGTAGTGTCATATCTAATTCATATCCTA
TACATAATCAACCTAAGCTAAG
UFO02430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-46Ca-RA | 1105 | CG1656-RA | 20..1003 | 8..985 | 4680 | 98.8 | Plus |
| lectin-46Cb-RB | 1039 | CG1652-RB | 267..341 | 285..359 | 180 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9817602..9818433 | 160..985 | 3770 | 98.6 | Plus |
| 2R | 25286936 | 2R | 9817319..9817472 | 8..161 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:03 has no hits.
UFO02430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:36 Download gff for
UFO02430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Ca-RA | 16..1008 | 1..989 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:32 Download gff for
UFO02430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Ca-RA | 16..1008 | 1..989 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:02 Download gff for
UFO02430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Ca-RA | 16..1008 | 1..989 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:02 Download gff for
UFO02430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9817315..9817472 | 1..161 | 98 | -> | Plus |
| 2R | 9817604..9818433 | 162..985 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:32 Download gff for
UFO02430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5704820..5704977 | 1..161 | 98 | -> | Plus |
| arm_2R | 5705109..5705938 | 162..985 | 98 | == | Plus |
