UFO02432.5prime Sequence
1000 bp (901 high quality bases) assembled on 2010-09-10
> UFO02432.5prime
CAGTCGACATGTTGCGTATTTTAAACAACTCCTTAAAAATATCAAAATAT
GCAACAGGTTGCGTGCAACAGGTCATTCGCTTTACCAGCAATGGACCCAG
TGATTTGGTCCTGGTCAAGGAGCATAACGGAGTGCGAGAGATAACGCTGA
ATCATCCAAAAACTCTGAATTCCCTATCACTGGACATGATGTGTGCCCTT
CAGGACGCCCTGCTAAAAGATAAAGACAACTTGGATCTGAGATGCGTGGT
CCTGACGGCCCAAGGAAAGATCTGGTCGGCAGGTCACAATCTCAAGGAGT
TGCACAATGACCCCAAGATACAGGCTTGTGTGTTCCAGAAGCTAACCGAT
GTTATAAACGACATCCAAAGACTGCCGGTGCCCGTACTAGGAAAAGTCAA
TGGCTATGCGGCTGCTGCAGGCTGCCAACTGGTGGTGTCATGTGACATGG
TAGTCTGCACCAAGAACAGCAAGTTCTCTACTCCAGGGGCTGGAGTCGGA
GTTTTTTGCTCAACACCCGGAGTCGCAGTTGCCCGGATTATGTCGCGTCC
AAAGTCCGCCTATATGCTAATGACCGGTCTTCCCGTTACTGGTGAAGAAG
CCTACATATCGGGAATGGTCACCAAAGCTGTTCCTGCAGAGGAACTAGAT
AAGGAGATCGAGGAATCACCAATGCCATAAGGCAAAAGTCGTGCCGTCAT
CTCTCTGGGAAAGAGTTCTACTACAGCACTGGCCATGTCCCAAGCGGAGC
CTTTCGGCTGCGCAGGAGAGATGTGCGAAATTTCCAGCTGGGCGACACCA
AGAGGGCATTGCTAGCTTCTCGAGAGCGCCACCCACTGGAGCACCAGGCA
GCTTTCTAGACATTCGTTTGGCGCGCGGGCCCAGGTAGTGGTCATATCAT
ATCATATCATATCTATCCCACTAGCCTAGGGAATCTGTCATGACTATGGC
TTGATTCTCACCAATAAAAACGCCGGCCACTGAGCGTTCTGACATCGAAT
UFO02432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6984-RA | 1030 | CG6984-RA | 30..884 | 9..847 | 3875 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17092013..17092492 | 9..488 | 2400 | 100 | Plus |
| 2R | 25286936 | 2R | 17092548..17092892 | 487..820 | 1190 | 95.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:26:46 has no hits.
UFO02432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:58:46 Download gff for
UFO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6984-RA | 1..858 | 7..847 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:32:36 Download gff for
UFO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6984-RA | 30..884 | 9..847 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:42 Download gff for
UFO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6984-RA | 30..884 | 9..847 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:42 Download gff for
UFO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17092013..17092491 | 9..487 | 100 | -> | Plus |
| 2R | 17092549..17092892 | 488..820 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:32:36 Download gff for
UFO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12979518..12979996 | 9..487 | 100 | -> | Plus |
| arm_2R | 12980054..12980397 | 488..820 | 96 | == | Plus |
