UFO02433.5prime Sequence
1013 bp (808 high quality bases) assembled on 2009-01-13
> UFO02433.5prime
CAGTCGACATGTTATTCCTAGCGCCGCGCAAACATCTGTTTGCCACCAAC
CTGATCATCCTGCTGATGATCTACTTGATGCGCAAGTGCCTGCAGCTCTT
CTGCATCATCGAGAACCGCGCCGTTCATCCGGCCGAGGAAGAGGAGAAGG
AGGTCAAGTTGCCGGAAAGGGAGATCCTCCAGAAGCGCCGCGGCGGCTTC
ACCATCATCCCAGCTGCCATGCACCAGAGCATGCACGGCTTCGGCTACGG
CGAGGGTCACTACCAGATCTTTGTGGAGAAGAAGGAGCGTAACCTCCCAA
CCAAATCGCGCCTTAACGCGGCCACTGCTGAAGTCAAGCTGAATCCCAAT
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATATATTTGCCCATGGTGAAACGGGGGCGAAGAAGTT
GTCCATATTGGCCACGTTTAAATCAAACTGGTGAAACTTCACCCAGGGGA
TTGGCCTGAGACGAAAACCATATTCTCATAAACCCTTTTAGGAAATAGGC
CAGGTTTTCACCGGAACCCGCCACATTCTTGCGATTTATTGTGGTAGAAA
CTGCGGAAATGGTCTGGTATCCTCCGGGCGATGAAACGTTCATTGGCTCA
TGAAACGTGTACAAGGTGACACTATCCAATCCACAGCTCACCGTCTTTCA
TTGCCATACGAAT
UFO02433.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8960-RB | 659 | CG8960-RB | 110..451 | 9..350 | 1710 | 100 | Plus |
| CG8960-RA | 1016 | CG8960-RA | 467..808 | 9..350 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2197540..2197881 | 9..350 | 1710 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:52:21 has no hits.
UFO02433.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:35 Download gff for
UFO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 463..813 | 1..358 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:29 Download gff for
UFO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 463..813 | 1..358 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:15 Download gff for
UFO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 463..813 | 1..358 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:15 Download gff for
UFO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2197536..2197881 | 1..350 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:29 Download gff for
UFO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2197536..2197881 | 1..350 | 98 | == | Plus |
