UFO02443.5prime Sequence
1087 bp (983 high quality bases) assembled on 2010-09-10
> UFO02443.5prime
CAGTCGACATGCTCGTTCTGGTACTCGGCGACCTGCACATCCCGCACCGG
TGCAGCAGCCTGCCGGCTAAATTTAAGAAGCTGCTGGTGCCGGGCCGCAT
ACATCACATCCTGGCCACCGGAAACATCTGCACCAAGGAGTCCTACGACT
ACCTGAAGTCCCTGGCCAATGATGTGCACATAGTGCGCGGCGACTTCGAC
GAGAACCTGACGTATCCGGAGCAGAAGGTGGTCACGGTAGGCCAGTTCCG
GATCGGTCTGTGCCACGGCCACCAGGTGGTTCCCCGCGGAGACCCGGAGG
CGCTGGCCCTCATCCAGCGGCAACTGGACGTGGACATCCTGATCACGGGG
CACACGTACAAGTTCGAGGCCTACGAGCACGGCAACAAATTCTACATCAA
TCCGGGATCGGCCACGGGTGCCTTCAACCCACTGGACACCAATGTGGTGC
CTTCGTTCGTGCTGATGGACATTCAGAGCACCACGGTGGTCACGTACGTG
TACCAACTGATCGGCGACGAGGTCAAAGTGGAGCGCATCGAGTACAAGAA
GATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGACCCTGATCGCCAGCGGCATCAGCAC
CTGTCGCCTGCGTATATATTTGCCCATGTGAACGGGGGGCGAAGAGTGTC
CATATGGCCACGTTTAAATCAAACTGGTGAACTCCCCCAGGATGCTGAAA
CGAAAAACTATTCTCATTAACCCTTTAGGAATAGCAGGTTCACCGTACAC
GCCAATCTTGGCAATAATTGGTAGAACGGCGATCGCT
UFO02443.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:26:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 999 | CG4764-RA | 98..643 | 9..554 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:26:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1150863..1151408 | 9..554 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:26:52 has no hits.
UFO02443.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:58:48 Download gff for
UFO02443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 77..626 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:32:40 Download gff for
UFO02443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 94..643 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:45 Download gff for
UFO02443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps29-RA | 94..643 | 1..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:45 Download gff for
UFO02443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150859..1151408 | 1..554 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:32:40 Download gff for
UFO02443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1150859..1151408 | 1..554 | 99 | == | Plus |
