UFO02444.5prime Sequence
1023 bp (908 high quality bases) assembled on 2010-09-10
> UFO02444.5prime
CAGTCGACATGTTTCGCAATCTTTCGATGCTGAGGAATCAGCTGGCGCTG
CACCGTGTCCGTGTGGCCCGCTCGACCTTGCACTCCAAAATGTCTACTGG
TCTTACTTGCCTCACCATTGACCGTCCGCGGAACATCGATGGCGTGACCG
TGATAGATATCAATATAAATGAGATGGCCAAGACTGACGTAGAGTTTAAT
CGCAATTTCGTCAATTCGCTGACATTGATGGACCATACTCCATTCAAAGA
GGTGACCAACATAGTGGACGCGGATGCAGTTGAGTCGCCACCAGCAGAGA
ATCCGATTTCTGGAGATACCGTGGAGATCCTGCCTACTGGCGCACCTAGT
TCCGTCGTAGGCGTCGACGGCAACCCCATTGTCCCCATCGAGATTGATGG
CTGGAACCAGGACGAGGAGGATCCCACCGTGCAAAAGAACGTCCAGGACG
TGGACATTGGTAACGATGACGAGTACAAGGCCGAGATGGAGCTGCGGGTG
CCGGAGGTCAGGGAAGGTCGAACCGAGTACAAGGGCATCAAGGTGACGTT
GCCGGAATCGGCCAACCAGGATGTCGGCACTTATCGCTTCCGCCGCGATC
CAAAGGATCTGGAGGAGGTCGGCGACGACACGCGCCTGGTTCGATACGAC
AAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACACTAGCCTAGAGATCC
TGGTCATGACTAGTGCTTGATTCTCACCAATAAAACGCCCGGCGGCAACC
GAGCGTTCTGAACAAATCCAGATGAGTTCTGAGTCATTACTGATTTTTCA
CAGAGTCCAAGCGAGCTCGATTATCAATTACGCCCCGCCTGCCACTCATC
GCAGTACTGTTTGTATTCATTAGCATTCTGCCGACATGAGCCATCCCACG
CATTATGACTGATCGCCAGCGCATCAGCCCTTGTCGCTTGCTTATTATTG
GCCATGTAAACCGGGCGAAGAGT
UFO02444.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-RA | 939 | CG17470-RA | 140..785 | 8..653 | 3230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20642460..20643105 | 653..8 | 3230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:26:55 has no hits.
UFO02444.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:58:48 Download gff for
UFO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 8..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:32:42 Download gff for
UFO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 8..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:48 Download gff for
UFO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 8..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:48 Download gff for
UFO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20642460..20643105 | 8..653 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:32:42 Download gff for
UFO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20642460..20643105 | 8..653 | 100 | | Minus |
