UFO02445.5prime Sequence
1080 bp (883 high quality bases) assembled on 2008-12-21
> UFO02445.5prime
CAGTCGACATGTTTTCCAAGTGCTTTCATTTGCTTTTGGCAGTACATTTG
CTGATTTCTCCGGTGGTACCTGTCCTTTTGGAGCCATCTGAACGCATCAT
CGGCGGAAGCAGCATGGACATCACTGATGTTCCGTGGCAGGTGTCCTTAC
AGTACTACGGCGAACATTTTTGCGGCGGATCCATCTACAGTAAAACCATA
ATTATAACAGCTGCCCACTGTATTAAAGAAGGTGAACGCTCAATTCGAGC
AGGATCCTCGCTGCATGATAGCGGAGGAGTTGTGGTGGGAGTGGAAGCAT
ATATCATTCACCCACAATTTGATAAACATAACATGGAGAACGACGTGGCT
GTCCTCAAACTGAGCAGGCCTTTAAGTTTTTCCGATTCCATACAAACAAT
TCCCTTGGCCGAGACGGATCCTCCCACGTCGTCTTCGGCGCTAGCCACTG
GCTGGGGACGTGGAAATTTTTTAATTCGACCACGACAACTTCAGGGAGTT
GAAATCCTTATTCGGCCGCTGATCGTGTGTAAATTGAAATATGGCAACGG
TGTGTTCAATGAGGACATCTGCGCGGGAAGAATGGGAAAAGGCGGCTGTT
ATGGAGATTCCGGTGGACCCTTGGTCTTCAACGGCCAGCTAGTGAGGATC
ACATCGAGAACGGGAAACATTTGTTTGCTTGAGATCTTCTCTGTACGCTA
GTGTGGCGCGTTATCGTAACTGGATCCTTAATGCCATCGATGTATTGCAT
TTTCAAGCACCCGCTACAATGTGGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCCACACAAGCCTAGGAGATCTTGTTCATGACTAGTGCTTGGAATTCTCA
CAATAAAAACGCCCGGCGCACCGACGTTCTTGAACCAATCCAGATGGAGT
TCTGAAGGTCATTACTGATTCTATCACATGAGTCAGCGAAGCTCGATATC
CAATTACGCCCCCGCTTGCACTCATTTGAAGTACTGTTGTAATTCATTAA
GCCATTCTGCCGCATGGGAAGCCATCCCAA
UFO02445.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Send1-RA | 875 | CG17012-RA | 11..770 | 9..769 | 3720 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2254281..2255040 | 769..9 | 3695 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:11:51 has no hits.
UFO02445.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:16 Download gff for
UFO02445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17012-RA | 1..781 | 1..782 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:55 Download gff for
UFO02445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Send1-RA | 1..781 | 1..782 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:53:05 Download gff for
UFO02445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Send1-RA | 1..781 | 1..782 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:53:05 Download gff for
UFO02445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2254270..2255044 | 1..782 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:55 Download gff for
UFO02445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2254270..2255044 | 1..782 | 98 | | Minus |
