UFO02462.5prime Sequence
1134 bp (959 high quality bases) assembled on 2008-12-21
> UFO02462.5prime
CAGTCGACATGGCACGAATCGTGTACGACGGCAAGTTCCATTGCGGAGGA
TCCTTACTGACGAAGGATTACGTTCTATCGGCCGCTCACTGCGTGAAGAA
ACTGCGAAAATCCAAAATCAGAGTCATATTCGGCGACCACGATCAAGAGA
TCACCTCGGAGTCACAGGCCATCCAACGTGCGGTTACGGCTGTGATAAAG
CACAAGAGCTTTGACCCCGATACATACAACAACGACATTGCCCTGTTGCG
ACTTCGCAAGCCTATATCGTTTTCTAAAATTATAAAGCCAATCTGCCTAC
CGCGCTATAATTACGACCCCGCAGGTCGCATTGGAACGGTTGTCGGCTGG
GGACGGACATCCGAGGGAGGAGAACTACCATCCATAGTTAATCAAGTTAA
GGTGCCAATCATGTCCATCACGGAATGCCGAAATCAAAGATACAAAAGTA
CTCGAATTACCTCATCCATGTTGTGTGCGGGTAGGCCTTCCATGGACTCA
TGCCAGGGCGACAGTGGAGGACCGCTGTTGCTATCCAATGGCGTTAAGTA
TTTCATCGTCGGCATTGTGTCCTGGGGCGTTGGTTGCGGCCGCGAAGGAT
ATCCGGGTGTTTACTCCAGAGTGAGCAAATTCATACCGTGGATTAAGTCT
AATTTAGAAAATACCTGCCTGTGTTCAGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATC
ATAATCACAACTAGCCTAGGAGATCCTGGTTCATGACTAGTGCTTGGATT
CTCACCAAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGGATCTATCAACAGGAGTCCAAGC
GAGCTTCATAATCAAATTACCGCCCCGCCCTGCCACTCATCGCAGTACTG
TTGTAATTTCATTAAGCATTCTGCCGACTTGAAAGCCATTACAAACGGCA
TGATGAACTGATCGCAGCGGCATCAGCACCTGGTCGCCTTGCTTAATAAT
TGGCCCATGGGTGAAACGGGGGGCGAAGAGTTGTCCATATGGCCACGGTT
AATCAAACTGGGTGAAACTCACCCAGGATTGGGC
UFO02462.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11836-RF | 1102 | CG11836-RF | 317..985 | 9..677 | 3345 | 100 | Plus |
CG11836-RE | 1076 | CG11836-RE | 291..959 | 9..677 | 3345 | 100 | Plus |
CG11836-RI | 1101 | CG11836-RI | 316..984 | 9..677 | 3345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25071810..25072127 | 9..326 | 1590 | 100 | Plus |
3R | 32079331 | 3R | 25072318..25072595 | 400..677 | 1390 | 100 | Plus |
3R | 32079331 | 3R | 25072185..25072266 | 323..404 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:09 has no hits.
UFO02462.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:01 Download gff for
UFO02462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11836-RC | 305..973 | 9..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:39 Download gff for
UFO02462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11836-RI | 316..984 | 9..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:51 Download gff for
UFO02462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11836-RI | 316..984 | 9..677 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:51 Download gff for
UFO02462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25071810..25072125 | 9..324 | 100 | -> | Plus |
3R | 25072187..25072263 | 325..401 | 100 | -> | Plus |
3R | 25072320..25072595 | 402..677 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:39 Download gff for
UFO02462.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20897532..20897847 | 9..324 | 100 | -> | Plus |
arm_3R | 20897909..20897985 | 325..401 | 100 | -> | Plus |
arm_3R | 20898042..20898317 | 402..677 | 100 | == | Plus |