UFO02464.5prime Sequence
1053 bp (914 high quality bases) assembled on 2008-12-21
> UFO02464.5prime
CAGTCGACATGAGTTTTTTGGGACTCTTGGCTTTTCTGGTTGCTGGTCTT
TGCTCCACCGCCCAGGCTTCGTTGGTGAAATGCTCTTGTGATCCTGGTCC
ACAGGGGGAACGAGGACCTCCAGGTCCGCCTGGACCTCCTGGCAATCAGA
ACGGTCTCTCTGGCAGTGGTTCTGGCTACTGGGGCTATCCACCCACAGGT
CCTTACCCCCCAAATCTGCCTTTCATCCAGGGGCCTAGAGGCTTACCAGG
ACCGCCTGGTCCTCCTGGATATTGTTTCCCATGCCCAGCTCCTCCACCTT
TGAGATCCTTTCCGCCACCGGGAGTTCCAGTCCCTCCTTTCATTTCCACC
CCAGGTGGTGGCGGATTTGGTGGAGCCTCTGCATTGACCACCGCTGTGGG
CAACATTATAGTGATTCCAGGAGGACCAGGAACGGGATTAGCTGGTCGCG
CTCAGTTCTTCCACATTTCACCCGATGGCCAGGTGGTGCAGATCGATCGA
CCGCAGAATCTGCCCAGTGAACTGTTCGATACACCGGTGAACCAAGGTTC
CGGTGCTCCCATTCCTCCACCGCAACCCACATCGTCATCTCTCTCGGGGA
TCACACCACCAGCAGTCCAAGTGCCACCAACTCAACCCACGCCCGGCGAT
CTGGGAGCCCAGCAGCCCACAATTTTGCCCGAGAATATGGAGGAAACTGT
GTTTGCGGGTGGCAATCGCAAGGACTTCCTGCGAGGTAGCTCCGATGCCA
GCGATTGGAGAAGGATTCTCCTCCTGGGAGAGCGACCCACCGATGGTCTA
CTCAAGGGCCAGTCCGTCCAGCAGCTCAGTCCCAACAGCTCGAGAGCAGC
GTGGAGAACTTCCAGAGGGCCTTTGGTCGAACTGAAGAGAGTATGCCACG
CTCATCCACGCGGTAACTCAACATATGCAGTCATCATTGCAAGCTTTTCT
AGACCATTCGGTTGGCGCGCCGGGTCCAGGTAGGTGGTCATATCATATTC
TTATCATATCAAATCCCACTAGCTAGGAGATTCTGGGTCTGACTAGGGCT
GGA
UFO02464.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10591-RA | 1075 | CG10591-RA | 35..971 | 8..938 | 4455 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5598695..5599560 | 908..45 | 4125 | 99.2 | Minus |
| 3L | 28110227 | 3L | 5599619..5599658 | 47..8 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:11:45 has no hits.
UFO02464.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:59 Download gff for
UFO02464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10591-RA | 24..973 | 1..943 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:51 Download gff for
UFO02464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10591-RA | 27..976 | 1..943 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:53:02 Download gff for
UFO02464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10591-RA | 27..976 | 1..943 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:53:02 Download gff for
UFO02464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5598656..5599559 | 46..943 | 98 | <- | Minus |
| 3L | 5599621..5599661 | 1..45 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:51 Download gff for
UFO02464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5591756..5592659 | 46..943 | 98 | <- | Minus |
| arm_3L | 5592721..5592761 | 1..45 | 91 | | Minus |
