UFO02469.5prime Sequence
1125 bp (-44 high quality bases) assembled on 2008-12-21
> UFO02469.5prime
CAGTCGACATGTCATCTCTGCGCTTAACTCAACAACAGCGCAATCATTTG
AGCCTGCTCCAAAAACCCGCCAGCGCTGTGGTGGAGCTGTGCAAGTCCGC
CTTTGATTACCTAATAAATGGACCCAATCCCAGCCGTTACGAGATGCTAG
CCAAAAAGTCCTCCGATTTGGGCAGTCCTGAGGCAGTGCAGCAGGCGGTG
GAGGCGCTGATATCCCTGCTCATCAGCGTGACCACCCGAGTGGGGAGCAG
TTCCGTCGACATGGAGGCCATACTGCGCCAGACATTCCCCGAACTCGGCG
ACGATGTGATAGAAGTTCTCGAGCAGTTCGTCACCAGCAAACGAAACTTT
GTGGAGGGCTCAATCAAGTCGGCCAACATACGTGCCTATCGGCTGGTCAA
CCTGGACTGGCGACTGGAGGTGCGCACCGCGTCGCGGAGCCTGCTGGATC
AGTGTCAGGTGGTGGTGACTATGAAGCTATATCTGCACACCGAACCGAAG
AATGAAAACCGAGAGCTGCTGGCGGTGGACATCTCCGGGCGCAGCGAACA
GGAGCTGAAGGCCATGCGGAGGACGAGCGGCTGCATCGAAAGGATTTGCT
AGTGCAGACGGATGTCTGCAGTCTGGTGCACATGATCAAAACGCTGGAGG
ACGCGTTGGCCGAGTCCAAGACGCGGCGCATTCGCAAAATTGTCGACCGA
ATACACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAAGA
GATCCTGTTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCACCGAGCGTTTCTGAACAATCCAGATGGAGTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTTCGATATCAATTACCCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCAATTAGCATTCTGCGAAATG
GAAGCAACCAAAACGGCTGGATGAACCTGATTCGCCAGCGCATAGAACTT
TGCGCCTGGGTTAAAATTTGCCCATGGGTAAACGGGGGCAAGAATTCCAT
ATGCCAGTTAATCAAACTTGGTAAC
UFO02469.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7168-RA | 1034 | CG7168-RA | 259..957 | 9..706 | 3440 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18224979..18225677 | 706..9 | 3415 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:37:57 has no hits.
UFO02469.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:25:27 Download gff for
UFO02469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7168-RA | 204..902 | 9..706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:33 Download gff for
UFO02469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7168-RA | 259..957 | 9..706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:17 Download gff for
UFO02469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7168-RA | 259..957 | 9..706 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:17 Download gff for
UFO02469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18224979..18225677 | 9..706 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:33 Download gff for
UFO02469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14050701..14051399 | 9..706 | 99 | | Minus |
