UFO02477.5prime Sequence
1126 bp (947 high quality bases) assembled on 2008-12-21
> UFO02477.5prime
CAGTCGACATGGGACTGTTATTATCGCGGCTCTGGCGGATGTTTGGCAAC
GAGGAGCACAAGCTGGTGATGGTGGGTCTGGACAACGCGGGCAAAACCAC
CATCCTGTACCAGTTCCTGATGAACGAAGTGGTCCACACAAGTCCCACGA
TCGGTTCCAACGTGGAGGAGGTCGTCTGGCGGAATATACACTTTCTTGTC
TGGGATCTTGGTGGTCAGCAGAGTCTGCGCGCCGCTTGGAGCACCTACTA
CACGAACACAGAGCTGGTGATCATGGTCATCGACTCCACGGACCGGGAAC
GGTTAGCTGTTACGCGGGAAGAGCTCTACCGGATGCTGCAACATGAGGAT
CTGAGCAAGGCCAGTTTGCTGGTCTATGCCAATAAGCAGGATCTCAAGGG
CTCTATGTCGGCGGCGGAAATCTCACGACAACTGGACCTCACCTCCATCA
AGAAGCACCAATGGCACATCCAGGCCTGCTGTGCGCTCACCGGCGAAGGA
CTCTATCAAGGATTAGAGTGGATCGTGCAGCGCATCAAGAACAAAAGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCTCAGCACTTTGTT
CGCCTTGCGTATTATATTTGCCCAAGGGTGAAAACCGGGGGCGAAGAAGT
TGTCCATATTGGCCACGTTTAAATTCAAACTGGTGAAACTCCACCCAGGA
TTGGGCTGAACGAAAACTATTCTCCAATATCCCTTAAGGATAGCCAGTTT
TCCCCGTAACCGCCCCATCTTGCAATATATGTGTAGACCTGCGCGAATTG
CTCGCTGAATCACTCGAAAGCGAGAA
UFO02477.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-RA | 1339 | CG7197-RA | 550..1086 | 9..545 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8298754..8299290 | 545..9 | 2685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:42 has no hits.
UFO02477.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:25:17 Download gff for
UFO02477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 508..1044 | 9..545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:07 Download gff for
UFO02477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 9..545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:11 Download gff for
UFO02477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 9..545 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:11 Download gff for
UFO02477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8298754..8299290 | 9..545 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:07 Download gff for
UFO02477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8291854..8292390 | 9..545 | 100 | | Minus |
