UFO02480.5prime Sequence
1100 bp (910 high quality bases) assembled on 2008-12-21
> UFO02480.5prime
CAGTCGACATGCCTGAAAGCGACGTGACTAAAATGAAGGTGGCGGATTTG
AAGCGCGAGCTGAAGCTTCGAGGGCTCGCCGTGAATGGAAATAAAACCGA
ACTGCAGGACCGATTGCAGACCGCGTTATTAGAGGGGGACCTTTCTCTGG
AGGATTCGGCCATAGCAGATGCCATTGACGACGACGATGTGTCTTTCACC
GACGAGGATGAGCACAAGCTGCTGGGCGATGAGAACGACGATGAGCTACT
GAAAAGTCCGGTTAGCACACCCACAACTGTGGCCATTCCGGACCTTCTAG
CGGAAGAGAAGACGTCTTCGGCCCCAGATGCAGCTGCGCCGACCAAGAAA
ATAGTTCTGAAGCGAAATAATTCCCAGCAGTCGACGGGCACGGTAGCCAG
CACGGGGACAACTCCATCGAAGGAGAACGAGGCGCCCGCTGCAGCTGCTA
GTGACTCCACCGGCGAAACTCCTACCAAGAAGCATAAGCCGATTGTGGTC
GGACCAAAGACGGAAGGAGAGTAGCCATCAGGCGACAAGAAACTTAACCA
GCTGACTGCACAAGAGCGATTGGAACTGCGGGCCAAAAAGTTTGGCATAA
CACCCCCCGCTGTGGCCAACACTGCAACCGCAGTGGCAGTGGCCATCAAT
AAATCCTCTAGTGCCTCCATTACGGCCAACAAAGGTAACAAGGAAACCGA
GGAGCAGCAAAAGGAGGCACTCAAAAAACGTGCCGAGCGTTTCGGATTCG
TGGTGCCTGACAAAGCACCGACCTCAAAGGCCGATGATCGTCTCCAGAAA
CGGAAGGAGCGATTTGGAGCAGGAAGCAGTCTCAGCAGCTACCACCACGC
CTACCACAACTGAATCCAAGGACGCCTGGTCAGAAGAAGGCGCGCGCTCG
CTTGGAAAGATCAAAACATCCCCGTCCACAATGCAAGCTTTTCTAGACCA
TTCCGTTTGGCGCGCGGGCCCAGTAAGTTGTCATAATATAATCATAATCA
TATCATAATCACAACTAGCCTAAGAAGAATCCTGGTCATGACTATGCTTG
GAATCTCCACCATAAAAAACGCCCGGCGCACGACGTTCTGAACAATCCCA
UFO02480.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8149-RA | 1156 | CG8149-RA | 70..991 | 9..931 | 4515 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9504807..9505700 | 37..931 | 4300 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:02:07 has no hits.
UFO02480.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:25:14 Download gff for
UFO02480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8149-RA | 61..993 | 2..937 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:55 Download gff for
UFO02480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8149-RA | 65..997 | 2..937 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:36 Download gff for
UFO02480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8149-RA | 65..997 | 2..937 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:36 Download gff for
UFO02480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9504809..9505706 | 39..937 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:55 Download gff for
UFO02480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5330531..5331428 | 39..937 | 99 | | Plus |
