UFO02484.5prime Sequence
1161 bp (958 high quality bases) assembled on 2008-12-21
> UFO02484.5prime
CAGTCGACATGGAAGATATACAAAGATTTCAAAGGTCTCTAAAAGACTTT
GATTATTTCAAAGACTTTCAATGTTTTCTGAATATCAAACACAATTCTCG
AGCGCGGGCAACGCATATAAAGAAAAGGAACCCAAGATTTAATCCATTGA
CCGATCTAAATGAGCATAAATTTCGACTAAAGTACCGATACACTAAGGAA
AACCTTCGCAGAATTATTGAAATTGTACGGGATGACTTGGAAATTGAATA
TTTTGAGCCGTTAAAGAGGGAGCAAGTTCCAATAGATTTGCAGATTCTAT
CCGCTATTCGCTTGTGGGGCGGCACAGAGCACCCCAAATTAACTGCAATG
GCCCATGGCGTTAGTTTACGCACTTTGGCAAAAATAACTAGGCGCGTGGC
ATCTGTCCTATCATCGAAAGCTTCCAGGTATATCCGAATGCCGGCTACTC
TATCGGAAAAGGAGCGATCTGGTTCGGCGTTTCAAGCAATTGCCAATATG
CCGCAAGTCATTGGTGCTTTACTACAGACAACTGTGAGGTTTCAACCGGA
AAACTGTGCCCCTGATCTGGATGGAGAGGAGCTTTTGCCCGCCCTTACCA
GCCGGGAGGAGGAACTTCACATTCAGATTGTTTGCGATGCGGCTCATAAG
ATAAGGGACCTTGATATCCGACTGATCGATGAGCAGTCCATGCTCACCGA
CACCGAGATGTTCGGTCTGTCCAAAATAAAGGATCGATTCAAACAGAACG
AGTTCCGGGGTCGTATTTTGCTGGGCAACGAAATGGTGCGCTGCTCCTCC
TCCCTGTTCACACCGGTTCGATTCCCGAGGAACAATCCGAGGAGCTGTAT
AACCACGCCCACGCGGTCACTACGCATCGGCTAGAAGTTGTCTCAATCTG
CTGATGAGTCGCTTCGGTATCCTTGCCACCGAATCCAGGGTTCCCATGGA
TCTGCAAAGCAAAAGATACGGCGTTTGGCCATACTCCACAACATGGCCAT
GGAGTGGGTCGATCCAAGCATTGAACCGGAACAGAACTTTTCCCCCTTTA
TTCCCCTTTCCTCAATTCCATTGGGAAGGTCACAAATCCCGAGAATTGAC
ACCATCCAAAAACATTCATTAAAACCCATTTTGCCTGCGCCAACTTTCTC
AAACCATTCCT
UFO02484.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12253-RA | 1240 | CG12253-RA | 30..1163 | 9..1138 | 5140 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10988284..10988982 | 328..1023 | 3195 | 98.1 | Plus |
| 2L | 23513712 | 2L | 10987835..10988155 | 9..329 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:24:06 has no hits.
UFO02484.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:25:24 Download gff for
UFO02484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12253-RA | 10..1063 | 1..1050 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:05 Download gff for
UFO02484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12253-RA | 21..1074 | 1..1050 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:35 Download gff for
UFO02484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12253-RA | 21..1074 | 1..1050 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:35 Download gff for
UFO02484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10987826..10988155 | 1..329 | 98 | -> | Plus |
| 2L | 10988286..10988982 | 330..1023 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:05 Download gff for
UFO02484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10987826..10988155 | 1..329 | 98 | -> | Plus |
| arm_2L | 10988286..10988982 | 330..1023 | 98 | -> | Plus |
