UFO02485.5prime Sequence
971 bp (803 high quality bases) assembled on 2008-12-21
> UFO02485.5prime
CAGTCGACATGTTTCTCACGCGTTCCGAGTACGACAGAGGCGTGAACACC
TTCTCGCCGGAGGGCCGCCTCTTCCAAGTGGAATATGCCATTGAGGCCAT
CAAATTGGGCTCCACAGCAATTGGAATTTGCACGCCAGAAGGAGTGGTTT
TGGCGGTGGAGAAGCGCATCACTTCGCCGCTAATGGTACCCAGTACTGTG
GAGAAGATTGTGGAGGTGGACAAGCACATTGGTTGCGCCACCTCCGGCTT
GATGGCCGATGCCAGGACTCTGATCGAGAGGGCACGCGTGGAGTGCCAGA
ACCACTGGTTCGTCTACAACGAGCGCATGTCCATCGAGTCCTGCGCCCAG
GCTGTGTCCACTTTGGCCATCCAGTTCGGTGATAGTGGCGACAGCGATGG
TGCCGCCGCCATGAGTCGTCCCTTTGGTGTGGCCATTCTATTTGCCGGCA
TCGAGGCGGGACAACCCCAGTTGTGGCACATGGATCCCTCCGGCACATTC
GTGCGCCACGGAGCCAAGGCCATTGGCTCGGGCAGCGAAGGTGCTCAGCA
GAATCTGCAGGACTTATTTAGACCCGATTTGACTCTCGATGAGGCTATCG
ACATTTCGCTCAACACACTTAAACAGGTTATGGAGGAGAAACTAAACTCC
ACCAATGTGGAGGTGATGACCATGACGAAGAAGAGAGTTCTACATGTTCA
CCAAGAGAGTGGAGCAGCACATTAAGAACATGCGGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAGTGGTCATAATCAAATCATAATCA
TATCATAATCACACTAGCTAGGAGATCCTGTCATGACTAGTGCTTGATTC
TCACCAATAAAAAACGCCCGGCGCAACCGACGTTCTGAACAATCCGATGG
ATTCTGAGTCCTTACTGGATCTATCAACGGATTCAAGGCGAGCTCGATTC
AATTACCCCGGCCTTTCCCCT
UFO02485.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha5-RB | 873 | CG10938-RB | 72..800 | 8..731 | 3520 | 99.3 | Plus |
Prosalpha5-RA | 884 | CG10938-RA | 83..811 | 8..731 | 3520 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17413100..17413696 | 140..731 | 2780 | 98.5 | Plus |
2R | 25286936 | 2R | 17412910..17413044 | 8..142 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:32 has no hits.
UFO02485.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:25:12 Download gff for
UFO02485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ProsMA5-RB | 64..809 | 1..740 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:25 Download gff for
UFO02485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha5-RA | 80..820 | 1..740 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:14 Download gff for
UFO02485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha5-RA | 80..820 | 1..740 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:14 Download gff for
UFO02485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17412902..17413043 | 1..141 | 97 | -> | Plus |
2R | 17413102..17413705 | 142..740 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:25 Download gff for
UFO02485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13300407..13300548 | 1..141 | 97 | -> | Plus |
arm_2R | 13300607..13301210 | 142..740 | 98 | == | Plus |