UFO02490.5prime Sequence
1102 bp (940 high quality bases) assembled on 2008-12-21
> UFO02490.5prime
CAGTCGACATGAACTTAAGCACAAGAGTTATGCTGAATAGGTTGACACAG
CAGTGTGTCTACAAGCGGATTGTGACCTTCTCCACCAAAACTGCGGAACA
TGTAATTGAAAATCAGGAGGAACAGAAGAAAGAGGCTCCGCCAACCACGC
CGACTTCACCGGTGAACCGGAAGACAATCATTCCGGCCAATTATCGGTTT
GTTTACCCAGAATTCCTGCCCGATCCGAAGGTGGAGTGGCGCAACCTCGT
GCGCGAGAAGCTGGAGCGACTGGACATGCTGGATCGCCGCAAACAGATCG
ACCTGCCCGAGTTCTACGTTGGATCTGTGCTTGCGGTGACAAGTTCGGAT
CCCCATGCCGCTGGCAAAACCAGTCGATTTGTGGGTATCTGTATCAATAG
GGATCGCTGTGGACTGCGCGCCCGTTTCATTCTTCGCAACGTGATTGATC
ACCAGGGAATGGAGGTGGTCTACGAGCTGTATGATCCTACCATCCTAAAG
ATCGAGGTGTTGCGGCTAGAGAAGCGACTGGATGACAGTCTTTTCTACCT
GCGGGACGCTCTTCCGGAGTACAGTACTTTTGATGAGAACATGGAGGCCG
AGCCGCTCGAGGAGGGTGCTCCGGTGCCGGTGAACGACATTAAGGTGGTG
CTTCCGTCCGCGTCCATGGCTGGAGCGCTGGGGAACGACAGAATCTGCGT
GGTGTGGCCAACATCGATGAGTATCTAAAAGACAAGCATCGCCTGTCGGC
GGCCAAGGTGCAGAAACCCATGGGAGAAGTACGACATGATGAAGGACTAC
CGCCACCTCGATTCCCGAGGAGGAGCAAACGGAGATCTTCGCCGAGGTGC
ACACGGAACTGCACGCCTTGAGCTGCACCGAAACGGCACAAGCGCAAGCT
GAACTTTCATTAGCCCAAGCAGCTGGCGGCAAGCTTTTCTAGACCATTCG
TTTGGCGCCGCGGCCCAGGTAAGTGTTCATAATCATATTCATATCATATC
TAATCCACACTAACCCTAGGAAGATCCTGGTCATGAACTATGCCTGGATT
CTCACACAATAAACCGCCCGGGCGCAACCGAGCGTTCTGAACATTCAAGT
GG
UFO02490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL19-RA | 1036 | CG8039-RA | 79..996 | 9..928 | 4310 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8674302..8675156 | 72..928 | 3795 | 98.3 | Plus |
| 3R | 32079331 | 3R | 8674187..8674250 | 9..72 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:37:47 has no hits.
UFO02490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:25:07 Download gff for
UFO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL19-RA | 62..993 | 1..936 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:27 Download gff for
UFO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL19-RA | 70..1001 | 1..936 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:10 Download gff for
UFO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL19-RA | 70..1001 | 1..936 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:10 Download gff for
UFO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8674178..8674250 | 1..72 | 94 | -> | Plus |
| 3R | 8674303..8675156 | 73..928 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:27 Download gff for
UFO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4499900..4499972 | 1..72 | 94 | -> | Plus |
| arm_3R | 4500025..4500878 | 73..928 | 98 | == | Plus |
