UFO02501.5prime Sequence
1027 bp (887 high quality bases) assembled on 2009-01-14
> UFO02501.5prime
CAGTCGACATGGATGACTCACGCGAAGAAAGCCAGTTCATTGTGGACGAC
GTGAGCAAGACGATTAAAGAGGCCATCGAGACGACCATCGGCGGTAACGC
CTACCAGCACGACAAGGTGAACAACTGGACCGGCCAGGTGGTGGAGAACT
GCCTGACGGTGCTCACCAAGGAGCAGAAGCCCTACAAGTACATTGTGACC
GCCATGATCATGCAAAAGAACGGTGCTGGACTCCACACCGCCAGCTCCTG
CTACTGGAACAACGACACCGACGGATCGTGCACAGTACGCTGGGAGAACA
AGACCATGTACTGCATCGTTTCGGTCTTCGGACTGGCCGTCGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGCCAGGTTTCA
CCGTACACGCCACATCTGCGATATATGTGTAGAACTGCGAATCGTCTGTA
TTCACTCCAGAGCGATGAAACGTTCAGTTGCTCATGAACGGTGTACAGGT
GACACTATCCATATCACCAGCTCACCGTTTCATGCATACGAATCGGAATG
AATTCCACAGGCGCAGAATGGATAAGC
UFO02501.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dlc90F-RA | 816 | CG12363-RA | 194..526 | 9..341 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18299422..18299754 | 9..341 | 1665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:50:19 has no hits.
UFO02501.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:48 Download gff for
UFO02501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dlc90F-RA | 210..550 | 1..341 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:01 Download gff for
UFO02501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dlc90F-RA | 186..526 | 1..341 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:58 Download gff for
UFO02501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dlc90F-RA | 186..526 | 1..341 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:58 Download gff for
UFO02501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18299414..18299758 | 1..346 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:01 Download gff for
UFO02501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14125136..14125480 | 1..346 | 97 | -> | Plus |
