UFO02502.5prime Sequence
911 bp (789 high quality bases) assembled on 2009-01-14
> UFO02502.5prime
CAGTCGACATGCGGATGTGCTCAACGATGTGGCTGCAGATGACGCTGGGA
CTGGCCCTGCTGGGTGCTGTGTCATTGCAGCAACTGCAGTCGTTTCCCAA
GCTCTGCGATGTGCAAAACTTCGACGACTTCCTCCGGCAGACGGGCAAGG
TGTACTCGGATGAGGAGCGAGTCTATCGCGAGAGCATCTTCGCGGCCAAG
ATGTCGCTGATCACGCTGAGCAATAAGAACGCCGACAACGGCGTGTCCGG
ATTCCGGCTGGGCGTCAATACGCTGGCCGACATGACCAGAAAGGAGATAG
CCACCTTGCTGGGCTCCAAAATCTCCGAATTTGGCGAGAGATATACGAAT
GGCCATATCAACTTTGTGACTGCCAGGAATCCGGCGAGTGCCAATCTTCC
CGAGATGTTCGATTGGCGCGAGAAGGGCGGAGTGACGCCACCGGGATTCC
AGGGTGTGGGATGCGGTGCCTGCTGGTCGTTCGCCACCACAGGAGCGCTC
GAAGGACATCTATTCCGGCGGACTGGAGTGCTGGCCTCGCTGTCGCAGCA
GAATCTGGTGGACTGTGCCGATGACTACGGCAACATGGGCTGTGACGGTG
GCTTCCAGGAGTACGGTTTCGAGTACATACGCGATCACGGTGTAACGCTG
GCCAACAAATATCCGTACACACAGACGGAGATGCAGTGCCGTCAGAACGA
AACCGCCGGACGTCCACCGCGCGAGAGTCTGGTGAAATTCGCGATTATGC
CACCATTACTCCCGGGGATGAGGAGAAGATGATGAGTGATGCCACGTTGG
GACGTGGCGTGCTCATGACGCGAATCATTTCGTTGACAGTACAGCGGTGC
ATCTACAGACGAGGATGCATCAGCGACTGATCCTCGTACTGTGTGGCTAT
GAACGAAATGG
UFO02502.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6347-RA | 1312 | CG6347-RA | 109..980 | 9..865 | 3955 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13838489..13838934 | 338..782 | 2180 | 99.8 | Plus |
| 2R | 25286936 | 2R | 13837719..13838048 | 9..338 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:14:01 has no hits.
UFO02502.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:47 Download gff for
UFO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 107..988 | 9..873 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:44 Download gff for
UFO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 109..990 | 9..873 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:01 Download gff for
UFO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 109..990 | 9..873 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:01 Download gff for
UFO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13837710..13838047 | 1..337 | 98 | -> | Plus |
| 2R | 13838489..13839041 | 338..873 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:44 Download gff for
UFO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9725215..9725552 | 1..337 | 98 | -> | Plus |
| arm_2R | 9725994..9726546 | 338..873 | 96 | | Plus |
