UFO02503.5prime Sequence
821 bp (706 high quality bases) assembled on 2009-01-14
> UFO02503.5prime
CAGTCGACATGCCGAAAAAGAAGACTGGGCAGCGTAAGAAGGCCGAGAAG
CAGAAGCTTCGCCTCAAGGAGATCCGCAGCAGAGAGGTGCCTCTTGCGGA
TTTGCCCTGCAATGCACCAATGGAGTGCGACAAGTGCGAGAAGAAGCAGA
AGTCGAGAGCCTTCTGCTATTTCTGCCAGAGCATTCAGAGATTACCCATT
TGCGCCCAGTGCGGGAAAATCAAGTGCATGCTAAAGACCGGCGACTGCGT
GGTCAAACATCCGGGCGTCTACACCACGGGCCTCGGAATGGTGGGCGCCA
TCTGCGACTTCTGCGAGGCTTGGGTTTGCCACGGACGCAAGTGTCTCCAA
AACCACGCCTGCACGTGTCCGCTGCAGAATGCGACCTGCCTGGAGTGCGA
ACGCGGTGTCTGGGAGCACGGTGGGCGCATCTTCAAGTGCTCCTTCTGCA
ACGGATTCCTGTGCGAGGACGATCAGTTCGAGCACCAGGCCAGCTGTCAG
GTGCTGGAGTCGGAGAACTACAAGTGTCAATCGTGCAACAAGCTGGGTCA
ATACTCCTGCCTGCGCTGCAAGACCTGTTACTGCGAGGATCACGTGCGTC
GCAAGGGCTTCAAGTACGACAAGAACAGCCATTCCATGCCCCAGTGCAAC
TACGATACCTCGGTGACCAGGACCTCAGCATGTCCACCGCGGTCCCCCAA
ATTCGGCGACAGCAACAGGAGGCAACAGCGACGACGAGGAGGATACGTGG
ATACTAATGGAGCGTTGCATGGCTATTATTGGGGCCGCCCGCAGTGGGGC
CTACTCCCTACGGGGGTGTAT
UFO02503.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Noa36-RA | 1138 | CG10009-RA | 68..884 | 9..818 | 3620 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28598727..28599221 | 503..9 | 2475 | 100 | Minus |
| 3R | 32079331 | 3R | 28598391..28598640 | 742..498 | 880 | 95.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:25:44 has no hits.
UFO02503.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:46 Download gff for
UFO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Noa36-RA | 59..877 | 9..821 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:16 Download gff for
UFO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Noa36-RA | 68..886 | 9..821 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:01 Download gff for
UFO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Noa36-RA | 68..886 | 9..821 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:01 Download gff for
UFO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28598311..28598637 | 501..821 | 92 | <- | Minus |
| 3R | 28598730..28599221 | 9..500 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:16 Download gff for
UFO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24424033..24424359 | 501..821 | 92 | <- | Minus |
| arm_3R | 24424452..24424943 | 9..500 | 100 | | Minus |
