Clone UFO02512 Report

Search the DGRC for UFO02512

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:25
Well:12
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG1896-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02512.5prime Sequence

620 bp (517 high quality bases) assembled on 2009-01-14

> UFO02512.5prime
CAGTCGACATGACTCCGCCGCACAAAAAGCATAGATTAAGTGAAGTTAAA
GCCAAGATTCAGCAAGTTATATCGAGTTTGGGGCAACTGGAGCAACAGAG
CTGTGGAGCAGGTCGCGATTTCGATGTGCACCGGGCGGAGGAGCTGCAGC
GGAGCACGGCAACCCTGCTGGATGAACTTGACCAAGTACCGGGCCAACAA
GTAGTCGACGAACAAAAACAAAGAAAACGCCGGCGACGCTTATATAGACG
AAGCCAACATCGGGTGATACGTGCAACCGTCAAATCTGAGGCTGCAGAAC
AGAAGTTCTCCATAGAACCGCCCCGAAATACCGCACTGGAACAAGCGAAG
CACATATCCCTGCGAAAACAACGCGATGCTGCCTCCATTTTGGAGACCTT
TGATCTTCTGGAGAACTTTGCGAGTCTCGTGAGGAGACAGAGCCGCCCTT
TGCCAAAACTGACCCACATGCGTCTGTTTGGCGCAGAGTCCAGAGAGACT
CAAGCTGGCCATGTCAAGGAGTCAGAAGGTGGCTTCCACTTGAATCTCAA
TGGAAGCTGTGGTTCTCGCGATCTTGCACTCCAAATAAAAAGGAAATTTC
TTGAATCGCCTCCCATGGGA

UFO02512.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG1896-RA 835 CG1896-RA 38..652 9..605 2575 96.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31744319..31744873 9..556 2385 98.2 Plus
Blast to na_te.dros performed on 2014-11-28 19:21:39 has no hits.

UFO02512.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:49 Download gff for UFO02512.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1896-RA 33..663 9..619 95   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:06 Download gff for UFO02512.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1896-RA 38..668 9..619 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:57 Download gff for UFO02512.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1896-RA 38..668 9..619 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:57 Download gff for UFO02512.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 31744319..31744933 9..605 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:06 Download gff for UFO02512.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27570041..27570655 9..605 96   Plus