UFO02514.5prime Sequence
876 bp (766 high quality bases) assembled on 2009-01-14
> UFO02514.5prime
CAGTCGACATGCCCGTGGTGAACGTGTCGGCTGCCGAGGAGTACCAGAAG
TACATTAATGCGGATAAGACGACCGTAGCTCTATTCGCCGCCGAATGGGC
AGAGCAATGCGGTCAGGTGAAAGACGCGCTGGAGGAGCTGGCCAAGATTA
CTGGCGAAAAACTGCAGTTCATCAGCCTAAACGCTGAACAATTTCCCGAG
ATTTCCATGAAACATCAGATCGAGGCCGTGCCCACAGTCATATTCTTCGC
CAAGGGCTCCGCCGTTGACCGTGTCGATGGTGTAGACATCGCCGCCATAA
GCGCCAAATCCAAAAAGTTGGCCGAAAACGCAAGCAGCGCGGCGGCAACA
GGACAAACGTTGGAGGAACGCCTAAAGGCCCTAATCAATACAGCTCCGCT
GATGATATTCATGAAGGGCGACCGAAATGGACCGCGTTGCGGATTCTCCA
AGCAGCTCATCGGCATTGTGAACGAAACCAACTTGCCGTACGAGACATTT
GACATCCTCGGCGACGAAGAAGTGCGTCAAGGCCTGAAAACCTACTCCGA
CTGGCCCACATATCCCCAGGTTTACGTCAAGGGTGAACTTATCGGCGGAC
TCGATATTATTAAGGAACTGCTGGCGAACAATGAGCTCGAGTCCACGCTA
AAGGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GTCATATCATAATCATAATCATAATCATAATCCACACTAGCCTAGGAGAT
CTGTCATGACTAGTGCTTGATTCTCACATAAAAACGCCGGCGGCACCGAG
CGTTCTGAACAAATCAGATGGAGTTCTGAGTCATACTGATTTTATCAAAG
GTCAGCGAGCTCGAATCATACGCCCG
UFO02514.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6523-RA | 837 | CG6523-RA | 84..730 | 8..654 | 3235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13366802..13367067 | 216..481 | 1330 | 100 | Plus |
| 2L | 23513712 | 2L | 13366530..13366740 | 8..218 | 1055 | 100 | Plus |
| 2L | 23513712 | 2L | 13367131..13367303 | 482..654 | 865 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:49:43 has no hits.
UFO02514.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:37 Download gff for
UFO02514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6523-RA | 65..718 | 8..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:22 Download gff for
UFO02514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6523-RA | 84..737 | 8..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:05 Download gff for
UFO02514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6523-RA | 84..737 | 8..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:05 Download gff for
UFO02514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13366530..13366740 | 8..218 | 100 | -> | Plus |
| 2L | 13366805..13367067 | 219..481 | 100 | -> | Plus |
| 2L | 13367131..13367310 | 482..663 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:22 Download gff for
UFO02514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13366530..13366740 | 8..218 | 100 | -> | Plus |
| arm_2L | 13366805..13367067 | 219..481 | 100 | -> | Plus |
| arm_2L | 13367131..13367310 | 482..663 | 97 | == | Plus |
