UFO02516.5prime Sequence
785 bp (45 high quality bases) assembled on 2009-01-14
> UFO02516.5prime
CAATCCACATGAGCCTGCCAGCTGCACTATTGCAGCGCCTGAAGAACCGC
GGACTTGTGACCAGACTTTCGGGAGCAGCACCGATTTCAGAACCTATAAA
ATATATTATAGCCGAGAACTACGATGACGATGACAAGAGCGGCCCTTACC
CGTACGAGGAGGACACATCGCCGGAACCCAAGCGCAGGATCGTCTAGGAG
AAGTTCTGGTCGCACCGCATCAAGGAGCGGATCGGCGTGAACGAGTCCTA
CCATGGCTACAAGCTGTGTCCCAACAAATACAACATATACCACAAGTGCT
CGCTGTACTGCGTAAACAAGTTCAACAGCTCGCCGCTTTCGCAGCCCAGC
CATAGGTATCTCAAGCGCTACAAGAGATTGCTGCGGAAGTATCCACTGGA
GGCGGGCTGGAAGGATGTCTACGATAGGGGCTGCAAGGCGTTTTACTTCT
ATAACTCGACCACACAGACTGTTTCGTGGCTACCTCCTTCGCATCCCAAA
GCACGGATCACCAACAGCGCCGCAGTGTTTCGCATACAACTGGTCAACTC
CAACGATGAGTTCAACTTCGATACCAACATGGTTCAGCCCAAGTCTTCTA
ACCAAGATGAACCCGACGAGCCCGACGTATTCGTTCCCGCCATGAAGCAA
AAGTCCAGAGATCTGGCATGATATATCCTACGACGTCGACGTAATGATAC
GCAAGCTTTCTAGACAATACGTTTGACGCGCGGTCGCAGGATAGTGCTCA
TACTCATAATCATATCATACTCATCATCATCTACT
UFO02516.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PQBP1-RA | 868 | CG11820-RA | 88..778 | 9..699 | 3080 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25066001..25066628 | 72..699 | 2825 | 96.7 | Plus |
| 3R | 32079331 | 3R | 25065878..25065942 | 9..73 | 265 | 93.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:27:04 has no hits.
UFO02516.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:35 Download gff for
UFO02516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11820-RA | 71..771 | 1..706 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:51 Download gff for
UFO02516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PQBP1-RA | 84..784 | 1..706 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:03 Download gff for
UFO02516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PQBP1-RA | 84..784 | 1..706 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:03 Download gff for
UFO02516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25066002..25066634 | 73..706 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:51 Download gff for
UFO02516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20891724..20892356 | 73..706 | 96 | | Plus |
