UFO02526.5prime Sequence
1060 bp (915 high quality bases) assembled on 2009-01-14
> UFO02526.5prime
CAGTCGACATGCTGGCGGCCAAAAAGGTGCTTAAAACAAAGAACCAGATG
GAGCCCCTCCAGGATAAGAAGCCCAGAGTGAAGACCAAGCCAAATGCGAA
GGGCAAGGTCAAGGAAAAGGGCACCGACAAGGAAAAGGGTAAGTTCAAGG
CCAAGGGCAACGGCAAGGGCAAGAACAAAAACAAGATCAGGGACTCCAAA
ACAAGCACCTCGCTGGCTCTGGAGCGCGGCAGCGGAGATGGACCGCATCA
GCTGGCCGAGGTGAGCCTGGTTGCGCTCCGCTTCATGGACATCTCGCTGC
GCCACTCGGATGTCCAGCTGCTTCAGTCCGCTAACGAGGGCGTCAACGAA
CGCCTGGTGGCCTTCTACTACGCCTACCTTCAGCACCGCCGTTATCGCTC
CGAGTTGGATTTGCACTTCCTGAATCCGGGCCTGGCCGCACGACTGCGCC
ACATGAATATGCGCCAGTTGTGGGCGATGGTGCGCGACCGCCGTCTCAAC
GAGAAACAGTTCATCCTGGTGCCGCTTTCCACCCATCCAAGACCCCACGG
ACACTGGTCCCTACTGGTGATTTCGCGGCCGGACAGCAAGTTTTACCACT
ACGATTCGTTGGACAACTGTCATTCGCCGTTGGCCGCCTCGGTGTCGGAA
ACTTTGCGGGCGCCCCTCGAAGCCTGAAGTTCGCCCTGGTCACCGGTCGC
TGCCTACAGCAGAGCGCCAAGCGGCTGGCAAGGAAGCTCCGGTCGCGACC
CTGCATCCGGAATTCACCTGATGTGCATGACCGACCACGTTGCGGACTAT
GTAGCCAGATGCGGATACGCCACCAGTTCGCTGCTCATCGCCGTAGACCA
AATCGCAGCATGCGACCCACCTGGTCGAGCTGATCCAGTCGCTCGGCGGA
TTCTCCCTCAAGAGGGCCACGCAGCTTTCTAGACATTCGGTTGGCGCCGG
CCCAGTAGTGGTCATAATCTTATCATAGTCTAATCTAATCCCACTAGCCT
AAGAAATCCTGTCATGACTGTGCTGATTCCACAATAAAAGCCGGGCGCAA
CGAGTTGACA
UFO02526.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1503-RB | 1405 | CG1503-RB | 218..1133 | 9..916 | 4380 | 99.1 | Plus |
| CG1503-RA | 1237 | CG1503-RA | 218..1133 | 9..916 | 4380 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21105620..21106152 | 541..9 | 2665 | 100 | Minus |
| X | 23542271 | X | 21104987..21105351 | 899..540 | 1575 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:01 has no hits.
UFO02526.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:34 Download gff for
UFO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 208..1136 | 1..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:38 Download gff for
UFO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 208..1136 | 1..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:38 Download gff for
UFO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 210..1138 | 1..920 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:38 Download gff for
UFO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21104987..21105349 | 542..899 | 98 | <- | Minus |
| X | 21105620..21106156 | 1..541 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:38 Download gff for
UFO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20976014..20976376 | 542..899 | 98 | <- | Minus |
| arm_X | 20976647..20977183 | 1..541 | 99 | | Minus |
