Clone UFO02527 Report

Search the DGRC for UFO02527

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:25
Well:27
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG11586-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02527.5prime Sequence

876 bp (728 high quality bases) assembled on 2009-01-14

> UFO02527.5prime
CAGTCGACATGACGATGCGACCTGATGACCACCGAAGGAAATGGGACAAG
AACGAGTACGAGAAGCTGGCGGCGGAGCGGCTGCTCAACCAGGTGGCACC
CAAGGAAGAAGAACCCGTACAGCGGGAGAACCTCAAGCGACGCGACTATA
AGGTGGACCTGGACAGCAAGCTGGGCAAGAGCGTTGTCATCAACAAGAAC
ACACCCACCTCGCAATCCGGTGGCTATTACTGCAACGTTTGCGACTGCGT
GGTCAAGGATTCCATCAACTTTCTGGACCACATCAATGGCAAGAAGCACC
AGCGCAATCTGGGCATGTCCATGAAGGTGGAGCGGAGCACCGTCGACCAG
GTAAAGGAGCGCTTCCAGCAGAACAAGAAGAAGATGGAGGAGAAGCAGAA
AGACTACGAGCTCGAGCGCCGCCTGCGGGAGGCCAAGGAGGAGGAGGATC
GCTACAAGGAACACCGCAAGGAGAAGCGAAAAGAGCGGAAGCGCAAGGCC
GAGGACACGGACTTCGAGTCCGGCGGCATGCCCGACGACATGGCCGCCAT
CATGGGCTTCTCCGGCTTCGTGGATCAAAGAAGAACTCGGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATATCACACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGATTCTCACCAATAAAAAACGCCCGGCGCACGAGCGTCTGAACAAA
TCCAGGATGGAGTTCTGGAGTCATACTGGATCTATCAAAGGAGTCAGGCG
AGCTCGATATCAATACGCCCCCGCCTGCCACTCACTCGCGAGTACTGTTG
TATCAATAAGCATTCTGGCCGCACTT

UFO02527.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG11586-RB 760 CG11586-RB 104..686 8..589 2890 99.8 Plus
CG11586-RA 1115 CG11586-RA 104..686 8..589 2890 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4261726..4262206 589..110 2355 99.8 Minus
3L 28110227 3L 4262264..4262367 111..8 520 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:15:44 has no hits.

UFO02527.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:34 Download gff for UFO02527.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11586-RA 86..677 1..589 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:07 Download gff for UFO02527.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11586-RA 95..686 1..589 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:23 Download gff for UFO02527.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11586-RA 95..686 1..589 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:23 Download gff for UFO02527.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4261726..4262204 112..589 99 <- Minus
3L 4262264..4262370 1..111 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:07 Download gff for UFO02527.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4261726..4262204 112..589 99 <- Minus
arm_3L 4262264..4262370 1..111 96   Minus