UFO02527.5prime Sequence
876 bp (728 high quality bases) assembled on 2009-01-14
> UFO02527.5prime
CAGTCGACATGACGATGCGACCTGATGACCACCGAAGGAAATGGGACAAG
AACGAGTACGAGAAGCTGGCGGCGGAGCGGCTGCTCAACCAGGTGGCACC
CAAGGAAGAAGAACCCGTACAGCGGGAGAACCTCAAGCGACGCGACTATA
AGGTGGACCTGGACAGCAAGCTGGGCAAGAGCGTTGTCATCAACAAGAAC
ACACCCACCTCGCAATCCGGTGGCTATTACTGCAACGTTTGCGACTGCGT
GGTCAAGGATTCCATCAACTTTCTGGACCACATCAATGGCAAGAAGCACC
AGCGCAATCTGGGCATGTCCATGAAGGTGGAGCGGAGCACCGTCGACCAG
GTAAAGGAGCGCTTCCAGCAGAACAAGAAGAAGATGGAGGAGAAGCAGAA
AGACTACGAGCTCGAGCGCCGCCTGCGGGAGGCCAAGGAGGAGGAGGATC
GCTACAAGGAACACCGCAAGGAGAAGCGAAAAGAGCGGAAGCGCAAGGCC
GAGGACACGGACTTCGAGTCCGGCGGCATGCCCGACGACATGGCCGCCAT
CATGGGCTTCTCCGGCTTCGTGGATCAAAGAAGAACTCGGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATATCACACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGATTCTCACCAATAAAAAACGCCCGGCGCACGAGCGTCTGAACAAA
TCCAGGATGGAGTTCTGGAGTCATACTGGATCTATCAAAGGAGTCAGGCG
AGCTCGATATCAATACGCCCCCGCCTGCCACTCACTCGCGAGTACTGTTG
TATCAATAAGCATTCTGGCCGCACTT
UFO02527.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11586-RB | 760 | CG11586-RB | 104..686 | 8..589 | 2890 | 99.8 | Plus |
CG11586-RA | 1115 | CG11586-RA | 104..686 | 8..589 | 2890 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4261726..4262206 | 589..110 | 2355 | 99.8 | Minus |
3L | 28110227 | 3L | 4262264..4262367 | 111..8 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:44 has no hits.
UFO02527.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:34 Download gff for
UFO02527.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11586-RA | 86..677 | 1..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:07 Download gff for
UFO02527.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11586-RA | 95..686 | 1..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:23 Download gff for
UFO02527.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11586-RA | 95..686 | 1..589 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:23 Download gff for
UFO02527.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4261726..4262204 | 112..589 | 99 | <- | Minus |
3L | 4262264..4262370 | 1..111 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:07 Download gff for
UFO02527.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4261726..4262204 | 112..589 | 99 | <- | Minus |
arm_3L | 4262264..4262370 | 1..111 | 96 | | Minus |