UFO02532.5prime Sequence
1013 bp (908 high quality bases) assembled on 2009-01-14
> UFO02532.5prime
CAGTCGACATGTACCAGGAATACCTATACCAACTGCGGGCCACCATCACC
CCGATGTGCCACGAGGAGCTGAAGGAACTGCTGAACGATGACGACAAGCT
GGACGAGAAGGTTGACGAAGTTCTCCAGGTGCTCCGAACACAAAAGACCA
GTGTTTTCGAGGACAACAGGAGTCGGGCGGAGCGCAATATCGAGCGGGAG
CCGCAGATCATCGAGCTGCGGGGGCAGCTGGCAGAACTCTCGGAGGATGG
GCGCACCAGGTGCTCCTCTGTCCAGGAGAAACTCTCACAGCTCAAGGAGA
AGTCGGGCGGAGTGGGCCTTGAAACGGCGCTGGCCCTGCTGCAGACAGCT
GCCTCCGAGAGCGAGGAGCAGACCGAGGAGATGGTCAAGAAGTTCAACGA
CAGCGATATCGGCGTGGAGGACTTTCTGGACGCGTTCCTCCCTATCCGGA
GGACCATGCACCTGCGTCGCCTCAAGGCCGAAAAAATGCAGGAGCTGATG
CGCAAACAGCGCCAGGGTCCGGGCCCAAATACTTCTCTGCCAGCCTACGG
AAACGTGCCCTCCAGCGGATTCTATCCCGCGTCTGGGGGCTCCGCCCCTT
ACCCAATCATGGGTCCCCTGATGCCCATGCCACCGCCATCCAGACCGTAC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGATTT
TATCAACAGGAGTCAGCGAGCTCGATATCAAATTACGCCCCGCCTGCCAC
TCATCGCAGTATTGTTTTATTCATTAGCATTCTGCGACTTGAGCCATCAA
AACGGCATTATTGACTGATCGCCCAGCGGCATCAGCACTTGGTCGCTTGG
CTATTAATATTGC
UFO02532.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps37B-RC | 1041 | CG1115-RC | 113..754 | 9..650 | 3210 | 100 | Plus |
| Vps37B-RB | 975 | CG1115-RB | 113..754 | 9..650 | 3210 | 100 | Plus |
| Vps37B-RA | 1024 | CG1115-RA | 113..754 | 9..650 | 3210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5226270..5226911 | 9..650 | 3210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:57:10 has no hits.
UFO02532.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:30 Download gff for
UFO02532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1115-RA | 103..761 | 1..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:03 Download gff for
UFO02532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1115-RA | 105..763 | 1..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:47 Download gff for
UFO02532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps37B-RA | 105..763 | 1..658 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:47 Download gff for
UFO02532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5226262..5226920 | 1..658 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:03 Download gff for
UFO02532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1051984..1052642 | 1..658 | 98 | == | Plus |
