UFO02534.5prime Sequence
1006 bp (911 high quality bases) assembled on 2009-01-14
> UFO02534.5prime
CAGTCGACATGGCAAAAACGAAGAAAAATGTAAGGGCCAAGGCGAAAAGC
GTGGTGGGGGCGGCCAAGCAGAAGGCTCAGGACATGAAGGCCAAGCTGCG
CGAGGATCGTCTGCTCCACAAGACCCTTACGCCCAAGAAGACGACCACCA
AGAAGGAGAAATCCGAGGCGAAACACAAGAAGCTGCTCAAGAGATTCGCC
GAAGCGCGTAAGAAACGCAAGGAGGAGCACAAGAATCGCGAGAAGACCAA
AGTTGTCGGAGATCTAAAACCACTGCGGGATGCCCTACCCTCGCTGCAGG
ACATCTACAAGCTGGTGAAGACCAAGCAAAAGGATGTCTCCGAGGGGGCA
GCCCTCACAGAACCAGAGGTCCGACTGAGTGCCAACGAGAAGATCCGGAA
AAAACGCACTGAAATGGTCAACACCGTCAAGTCCTTCGAAAAGCTCATCA
AAGACAAGAACTTCAAGAAGAATCCCCGCGAAGTCATCGCCGCCCATGTG
CGCAACAAGTACCAGGCGATGGAAGAGGACGACTACGAAGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGTAGCATCACAAACG
CATGATGATCTGATCGCAGCGCATCAGCACTGTCGCTTGCGTATAATATT
TGCCATGTGAAACGGGGGCGAGAGTGTCATATGCCACGTTAATCAACTGT
GACTCACCAGGATGCTGAACGAAACATCTCATAAACGTAGATAGGCAGGT
TTCCGT
UFO02534.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 764 | CG16753-RA | 78..608 | 9..539 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3055156..3055686 | 9..539 | 2655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:26:47 has no hits.
UFO02534.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:30 Download gff for
UFO02534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 48..592 | 1..545 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:38 Download gff for
UFO02534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 1..545 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:53 Download gff for
UFO02534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 1..545 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:53 Download gff for
UFO02534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3055149..3055693 | 1..545 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:38 Download gff for
UFO02534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3055149..3055693 | 1..545 | 99 | == | Plus |
