Clone UFO02537 Report

Search the DGRC for UFO02537

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:25
Well:37
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG10053-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02537.5prime Sequence

639 bp (27 high quality bases) assembled on 2009-01-14

> UFO02537.5prime
CAATCCACATGTCTGACGAGGAGGAGGATTATATGTCCGACAAATTCCTG
GTTGGTCTGCAAGATGTCCGACCGAGTTTGGTGCACAATCGCGGCAGAAA
GCGGCAGATTGAAGTCGAGTCCAAGAAGGATGACCTGAACAAGCGCCAAC
GGGAGACAGCCCCTTCTTCCGGGAACGTAAACCAGGTTCTCCTTCAACAG
TCCCTCAACAAACCAATTTCCGCCGACAACAAAGGATTCCAGCTACTGGC
CAATATGGGCTACAAAGCCGGTTCTGGGTTGGGCATAACTTCCGATGCTC
GTACTGAACCCGTGGGGATAACTATAAAGAGCGGTCGTGGAGGACTTGGG
CGCGAGGCAACCGTTGCATAGTTGGCCCTCAAGCGGCAGAAGTTGCGGAG
GGCACATCTCCTAAACAAGGCCGGCGTTAGAAGCGACGAGGAACTCACTA
CAGAGGCTTATAGGAGGCGCGCGACCCATAAAGCGGATGAGCGAAAATTA
CAGGATGACATAAAACGGTGCCAGCACACCTGCGAATCGTTGGATCTTAA
GTCCGCTATCACACAACCCGATCTCGATTTCTTTTGGCGCCTAAACACAG
ATGATGATGAATCACAGAGCGACGTTGACGATCCTGAGT

UFO02537.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG10053-RB 982 CG10053-RB 161..792 9..637 2690 95.3 Plus
CG10053-RA 856 CG10053-RA 35..666 9..637 2690 95.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7247365..7247950 55..637 2410 94.9 Plus
3R 32079331 3R 7247250..7247296 9..55 235 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:15:32 has no hits.

UFO02537.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:24 Download gff for UFO02537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10053-RA 3..644 1..639 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:00 Download gff for UFO02537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10053-RA 28..669 1..639 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:17 Download gff for UFO02537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10053-RA 28..669 1..639 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:17 Download gff for UFO02537.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7247243..7247296 1..55 94 -> Plus
3R 7247366..7247953 56..639 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:00 Download gff for UFO02537.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3072965..3073018 1..55 94 -> Plus
arm_3R 3073088..3073675 56..639 94   Plus