UFO02546.5prime Sequence
1041 bp (927 high quality bases) assembled on 2009-01-14
> UFO02546.5prime
CAGTCGACATGGAGAATTCTCGCACGCCCACGAACAAGACCAAAATTACG
CTTAATCGCACGCCAACGCTAAAGGAGCGCAGATGGAACACCCTGAAGGT
GAACACCTCCAACGTGCGATGCTCTACTCCGATCTTTGGCAACTTCCGTT
CGCCCAATCTCTCGCCCATCGAGAATATGGGCACGAAGGGGAAGAGTCCA
GTGTCGCCCATGCGGTTCGCTACCTTCAAGAAAGTGCCAACGAAGGTGCA
TCCCAAGCAGCAGCAGCAGCAGCAGCATCAGCACTGCCATCGCACTCAGC
TTAAGCCCCCGCCATTCGTGCTGCCCAAGCCGCAGGAGGAGATCATCGAG
CCGGAGCGAGAAATAAAGAGCTGCAGCAGCCCGGATACCTGTTCGGATGA
CTCGAATATGGAGACCTCACTGGCCTTGGAGTCGCGTCGTCGTTCCATCA
AAGCATCGAACCACTCGTACGTGGTTAACCATGCCGCCAATGTGGAACAG
ATTCTCATGCACATGGGCCTGGAGAACTATGTGACCAATTTCGAAGAGGC
TCACATCGATCTGGTGGAACTGGCATCCTTGGAGCGTGCTGATCTTGTTA
AAATCGGCCTAAATACCGATGAGGATTGCAACCGTATCATGGATGTGCTC
CACACTCTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTCTGAGTCATTAC
TGGATCTATCACAGGAGTCCAGCGAGCTCGAAATCAAATTACGCCCCCGC
CCTGCCCCTCATCGCAGTACTGTGTAATCATTAGGCATTCTGGCGAAATG
GAGCCATCCCAAACGGCATGATGACCTGAATCGCCAGCGGCATCAAGCAC
CTGGCGCTTGCTATAATATTGCCATGGGGAAACGGGCGAGA
UFO02546.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 1092 | CG18543-RA | 64..714 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8413075..8413725 | 9..659 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:50:42 has no hits.
UFO02546.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:27 Download gff for
UFO02546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 61..715 | 9..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:59 Download gff for
UFO02546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..718 | 9..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:34 Download gff for
UFO02546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..718 | 9..664 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:34 Download gff for
UFO02546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8413075..8413729 | 9..664 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:59 Download gff for
UFO02546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8406175..8406829 | 9..664 | 99 | == | Plus |
