UFO02547.5prime Sequence
688 bp (587 high quality bases) assembled on 2009-01-14
> UFO02547.5prime
CAGTCGACATGCCACCGCGGTTGCCGTTCGGACAAGTCAGAAACTTATTG
ATTCAGGGACACATAATTCGAAGGATGAGCTCCCAACACAAGGTGTACGT
AACCAGGCCGGATGTGGATGACAGCGGTCTGGAGCTGCTGCGCAAGAGCT
GCCAAGTGAGTACCTGGCATGAGACCAATCCGGTGCCCCGCTCCGAGCTT
ATCCGCGTCGTGGCCGGAAAAGATGCCCTTTACTGCGCTCTAACGGACAA
GGTTGACAAGGAAGTCTTGGATGCTGCCGGTCCTCAGTTGAAGTGCGTGG
CAACTATTTCGGTGGGTTACGATCACATCGACGTGGAGGAGTGCAGGAAA
CGTGGAATTCGAGTGGGCTTCACACCGGACGTCCTAACGGATGCCACGGC
AGAATTAACGCTTGCCCTGCTTCTGGCCACCAACCGCCGACTATTCGAGG
CCAACAAGCAGTTTACAACGGCGGCTGGAAGTCGTGGGCCCCCATGTGGA
TGTGCGGCCAGGGACTGAAGGGCTCCCGGGTCGGCTGCTGGGCTTCGGCC
GCATCGGCCAAGAGATAGCGGCACGCATTGTGCCATTTAGCCGACGGAGA
TAACATACACAACACGATCACTGCGCCCCAGGAGGCGCTGCTGTGATGCC
CGCACGTGGACTTGACAGAATGCTTCCGGAGTCGACTT
UFO02547.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1236-RA | 1190 | CG1236-RA | 42..725 | 9..684 | 3145 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5737003..5737489 | 147..630 | 2285 | 99.4 | Plus |
3R | 32079331 | 3R | 5736789..5736928 | 9..148 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:22:16 has no hits.
UFO02547.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:26 Download gff for
UFO02547.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1236-RA | 40..729 | 1..684 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:26 Download gff for
UFO02547.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1236-RA | 36..725 | 1..684 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:15 Download gff for
UFO02547.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1236-RA | 36..725 | 1..684 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:15 Download gff for
UFO02547.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5736783..5736928 | 1..148 | 97 | -> | Plus |
3R | 5737005..5737548 | 149..684 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:26 Download gff for
UFO02547.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1562505..1562650 | 1..148 | 97 | -> | Plus |
arm_3R | 1562727..1563270 | 149..684 | 97 | | Plus |