UFO02550.5prime Sequence
929 bp (788 high quality bases) assembled on 2009-01-14
> UFO02550.5prime
CAGTCGACATGCTGTTTCTAAAGGACAAGCGTACCACTCTGGACGTAGCA
GAGCACACAGTAATCATACCGAGCATTTGCGTGGGAAACGCGGCGCAGCT
GGCCTGTGACCTGTTGATTGCGTCCAAGGAACTCCGGCGAATTGGATCCA
TCACACATCCAGCCCTGATTCCGGTCTACGGACCCTCCGCCTATCAGCAC
GAGCCCAAAGAGAAGGTCTCCTCCTGCGAACTGTACGAGGGTACGGAGGA
TAAGCTACTGGTCGTGCAATTCCGGGCGCCATGGGTTGCCCGCCACACCG
CGCATTTTCAGAAGGAACTAGTGGAGCTCCTCAAGGGCGCCAGACGCGTA
GTCATTCTAAGCGGCAGTTTCGGCTTCGAGAAACGAGTCATTGAGGAGTC
GCCATGGGCATACCGCGCCAGCGAAAACTTCAAGGAAGCGCATGCTGCCC
AGCTGGGCAATGAGGAGCTGATCAAGTGGAAGGAGCACAAGGGCGATGCC
ATCTATGGCGGCGGCAATGCCTTGCAGTTGTTTAAAGCCTTCGATGAGCA
GACGTGCCCGTCATGCTGTTATTCCGCTATCTCCTCGAGGGCGACAACTC
CACCGATGCATCTCTAATCGTCCGGGAACTGAACGAACTCTGCGAAGACT
TCCTTCAGCTGCGCAACGGAGGCGATGGCAGTTTAAGCTCACCGTGCCCA
AGTCCTGAACCTACTATTCGGCAATGATGTTACGGACTTCTTTTGCAAGC
TTTCTAGACCATTCGTTTGGCGCCGCGGGCCCAGGTAAGTGGTCATAATC
ATATCATATCATAATCATAATCACAACTAGCTAGGAGATCTGGTCATGAC
TAGTGCCTGATCCCCCAATAAAAACGCCCGGCGCACGAGCGTCTGAACAA
TCGATGGAGTTGAGTCCTTACTGATCTTC
UFO02550.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12321-RA | 903 | CG12321-RA | 103..842 | 9..744 | 3585 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18187875..18188605 | 736..9 | 3490 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:06:35 has no hits.
UFO02550.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:02 Download gff for
UFO02550.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12321-RA | 58..808 | 9..756 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:46 Download gff for
UFO02550.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12321-RA | 103..853 | 9..756 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:59 Download gff for
UFO02550.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12321-RA | 103..853 | 9..756 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:59 Download gff for
UFO02550.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18187855..18188605 | 9..756 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:46 Download gff for
UFO02550.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14013577..14014327 | 9..756 | 98 | | Minus |