UFO02552.5prime Sequence
881 bp (746 high quality bases) assembled on 2009-01-14
> UFO02552.5prime
CAGTCGACATGGATCCAACACCGCCGCTTCGTGCCACCAATAGTATTAAC
CCACAGCAGGTGGCAAGCGTTCCACCGCCACCGCCAACGGGGCAAATCAT
AGCTCCATCGGGAGCGTTTCCTGGATCCCTGACTCCCGGCTGGAATGACC
CGCCACCCATTTCGGCGGATTCTCAGAGCTGCAAATTAAACAATAGTCGT
CCACGCCTAGATCTTCGCAAGCGCGTGGCCCACCCGCTGGACGGGAAGTC
CTCTAGTGTCCAGCTGGTTCAGCCACAACTATCAATACCTACAGCACAAG
ATTCAATCTCGCCGCGTCCCGTGGCCCTGGTAACACCCCAGCGCCAGATT
CCATATCCGGATCCCAACAATCCACCGGCCGGTGGAGCGGATGTGGGCGG
TTTCGGAGCGGGACCAAATGCCAATGCCGTGCGCCTGCCACCGTTGGCCC
ACAGCATCAGCATCGATCCCTCCAGGGTGGCCAAGGTTCCACCAAGAACC
AAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGA
TCTATCACAGGAGTCCAAGCGAGCTCGATTATCAATACGCCCCCGCCTGC
CACTCATCGCAGTACTGTTTGTTATTCATTAGCATTCTGCGGACTGAGCC
ATCCCAAACGCATGATGACTGATCGCAGCCGCATCAGCCCCTGTCGCTGC
GTAATAAATTGGCCATGGTGAACGGCGAAAG
UFO02552.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2147-RA | 746 | CG2147-RA | 86..581 | 8..503 | 2480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8240938..8241318 | 123..503 | 1905 | 100 | Plus |
| X | 23542271 | X | 8240769..8240885 | 8..124 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:32 has no hits.
UFO02552.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:00 Download gff for
UFO02552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2147-RA | 79..585 | 1..509 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:44 Download gff for
UFO02552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2147-RA | 79..585 | 1..509 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:56 Download gff for
UFO02552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2147-RA | 79..585 | 1..509 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:56 Download gff for
UFO02552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8240762..8240884 | 1..123 | 96 | -> | Plus |
| X | 8240939..8241327 | 124..515 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:44 Download gff for
UFO02552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8134795..8134917 | 1..123 | 96 | -> | Plus |
| arm_X | 8134972..8135360 | 124..515 | 98 | -> | Plus |
