Clone UFO02555 Report

Search the DGRC for UFO02555

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:25
Well:55
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG7906-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02555.5prime Sequence

449 bp (357 high quality bases) assembled on 2009-01-14

> UFO02555.5prime
CAGTCGACATGAAGACTATTTTGGTTTTAGCCATCCTGTCGCTGGCGCAA
GCCGCCGAGTTGACTCAGACTACGGAAGCCGCAACTACAGCCACAACGGG
GAAACCACAGCAAACGGAGCTCCCCATTCACATCCAGAACCTGATAACCA
GCCACATCAATCATGTACTCCAGCACATAAAGAACAAACCTCAGGTTTCG
AACACATTGAGTGGACCTGTGGATTGGCATGGGAGTGGGAGTGGGAGTGA
GGGCGGTGCGCCAGTGGTCAAGCCCCATCCAGATCCCCTTCCCCCATTGG
CACACTCTGGGTGATGTCCTTGCCCCCTCCCCTTGCCGACGTCCCAGCCG
GCTGCACCTGCGTTGCAATCTGGCATACAGTCGGTGCAAGCTGGGCAATC
ACCCGGGTGAAAGGTGAACCCATCACCAGGCCACCCGGTACTTCTAATC

UFO02555.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG7906-RB 1351 CG7906-RB 132..559 7..442 1920 97.2 Plus
CG7906-RA 1233 CG7906-RA 43..470 7..442 1920 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14237018..14237381 28..394 1655 98.6 Plus
Blast to na_te.dros performed on 2014-11-28 20:51:08 has no hits.

UFO02555.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:57 Download gff for UFO02555.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7906-RA 38..476 1..449 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:38 Download gff for UFO02555.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7906-RA 38..476 1..449 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:33 Download gff for UFO02555.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7906-RA 38..476 1..449 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:33 Download gff for UFO02555.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14237021..14237430 31..449 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:38 Download gff for UFO02555.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14230121..14230530 31..449 96   Plus